Rv0668 - c.3468G>C
Drug resistance types
120 Sensitive
2 RR-TB
42 HR-TB
3 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8;lineage4.9 | 2 |
| lineage4.9 | 156 |
| lineage3 | 3 |
| lineage2.2.1 | 4 |
| lineage1;lineage4.9 | 2 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage4.5 | 1 |
| lineage2.2 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage2;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.1.1.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4 | 1 |
| La1;lineage4.9 | 2 |
| lineage1.1.3.1 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.3.4.1 | 3 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.3.4 | 1 |
| 1 | |
| lineage1.2.1.1 | 1 |
| La1.7;lineage4.9 | 3 |
| La1.7.1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.1.2 | 3 |
| lineage4.9.1 | 1 |
| lineage4.1.2.1 | 2 |
| La1.7;lineage4.2 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| La1.2.BCG | 1 |
| lineage4.9;lineage7 | 1 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.3.3 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 219 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR1180300 | Sensitive | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR1159378 | Other | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR6358979 | Other | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR400326 | Other | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR5341453 | Other | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR363502 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1238558 | Other | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | SRR1172717 | Sensitive | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR6866410 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR11465189 | RR-TB | lineage4.9.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR245675 | Sensitive | lineage1.1.2 | None | SRR1915487 | Other | La1.2.BCG | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR9786076 | Sensitive | lineage3 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR6045010 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR11466514 | Sensitive | lineage4.3.4.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR11465351 | Sensitive | lineage4.1.2.1 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4819051 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR5341467 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None |
|---|
