EBG00000313339 - n.443C>T
Drug resistance types
45 Sensitive
0 RR-TB
18 HR-TB
6 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
23 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 58 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage3 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.5 | 2 |
| lineage6.1.1 | 2 |
| lineage2.2.1.1 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1 | 4 |
| lineage4.6.3;lineage4.9 | 1 |
| 2 | |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.8 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage4.9;lineage9 | 2 |
| La2;lineage4.9;lineage9 | 1 |
| lineage4.9;lineage7 | 1 |
| La1.2.BCG | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage1.1.2 | 1 |
| La1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 92 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283055 | HR-TB | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR752229 | Other | lineage4.5 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | SRR15722988 | Sensitive | lineage2.2.1.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR369158 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR987722 | MDR-TB | None | ERR369159 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | SRR29097026 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | ERR349300 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR349265 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR373947 | Other | lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | ERR4769427 | Other | La1.2 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | None | ERR363456 | Sensitive | lineage4.9 | None |
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