Rv0001 - c.627G>A


Drug resistance types
4 Sensitive 2 RR-TB 38 HR-TB 8 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 72 Other
lineage Counts
lineage Count
La3;lineage2.1;lineage4.9 2
lineage4.9 31
lineage4.9;lineage9 1
lineage3 2
La3;lineage2.1;lineage4.9;lineage6.3 4
14
La3;lineage2.1;lineage6.3 1
lineage2.1;lineage6.3 2
lineage2.1;lineage4.9 12
lineage2.1;lineage4.9;lineage6.3 9
lineage2.2.1 6
lineage4.1.3 2
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La1.7;M.canetti;lineage4.9 2
lineage4.4.1.1 1
lineage4.3.3 1
M.canetti;lineage2.1;lineage4.9 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2 1
La3 2
M.canetti;lineage2.2 2
lineage4.6.2.2 1
lineage1.1.3.1 1
lineage4.9;lineage6.3 3
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage6.3.1 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.2.BCG;La1.8.1 1
lineage2.1 2
lineage1;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.1.1.1 1
M.canetti;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage2.2.2 1
La3;lineage1.1.2 1
lineage4.6.1.1 1
lineage4 1
lineage3.1 1
lineage4.5 1
lineage4.1.2.1 1
lineage4.9;lineage7 1
spoligotype Counts
spoligotype Count
None 129
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR4797588 MDR-TB lineage3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811493 HR-TB lineage4.9 None
SRR3675572 Other None
SRR1184381 MDR-TB None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4800341 HR-TB lineage3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR4816466 HR-TB lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046564 Sensitive lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR3675248 Other lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR108471 HR-TB lineage4.9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR4812155 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675457 Other lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1172817 Other La3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675311 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR9786645 Other lineage4.6.2.2 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR7496509 Other None
ERR9786671 Other None
ERR9786604 Other None
SRR1184372 MDR-TB None
ERR9117709 Other None
SRR6789626 Other None
ERR234659 HR-TB None
SRR18213713 HR-TB None
SRR1196768 MDR-TB None
SRR6045795 Other lineage2.2.1 None
SRR1196583 Other lineage4.9 None
SRR3675275 Other lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9787139 Other lineage6.3.1 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1173355 Other lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR1184312 Other lineage2.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR12142341 HR-TB lineage2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR400326 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR3797070 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR6044875 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR6458423 HR-TB lineage2.2.1 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3283018 HR-TB lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
SRR1172857 Other None
ERR9787197 Other None
SRR3675236 Other None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
ERR3283055 HR-TB lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045526 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SRR6046133 HR-TB lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR4811031 Other lineage4.5 None
ERR4811030 Other lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR4814639 HR-TB lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR1172951 Other lineage4.9 None
SRR3675387 Other lineage4.9 None
SRR1172728 RR-TB La3 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None