Rv3696c - c.1155G>C


Drug resistance types
62 Sensitive 5 RR-TB 41 HR-TB 8 MDR-TB 4 Pre-XDR-TB 2 XDR-TB 109 Other
lineage Counts
lineage Count
M.canetti;lineage4.9 3
La3;lineage2.2.1 1
lineage4.9 94
lineage1.1.3.2 1
lineage2.1 3
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage6.3 1
lineage2.1;lineage4.9 8
La3;lineage2.1;lineage4.9;lineage6.3 4
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.1.2.1 8
La1.7;lineage4.9;lineage7 3
12
lineage2.2 3
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage5.2 2
lineage2.1;lineage4.9;lineage6.3 7
lineage2.2.1 11
lineage4.1.1.3;lineage4.9 2
lineage4.1.2 2
lineage4.9;lineage6.3 4
lineage1;lineage4.9 1
lineage2.2.1.2;lineage7 1
La3;lineage2.1;lineage6.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2 1
M.canetti;lineage2.2.2;lineage6.2 2
La3;lineage2.1;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.9.1 1
La3;lineage1.1.2 1
lineage2.2.2 1
lineage4.4.1.1 2
La3;lineage4.9 3
La1;lineage4.9 1
lineage3 4
lineage4.1.3 2
M.canetti;lineage2.2 2
lineage4.1;lineage4.8 1
lineage1.2.1.2 1
lineage4.8 2
lineage2.2.1;lineage4 1
lineage4 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.1.1.1 2
La3 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.6.2.2 1
La1.7;lineage4.9 1
lineage1.1.1;lineage4 1
lineage5.1.4 1
lineage6.1.3 1
lineage4.5 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage4.1;lineage4.9 1
lineage4.6.1.1 1
lineage4.3.3 1
lineage6.3.1 1
lineage2.1;lineage6.3 1
La1.8.1 1
La1.7;lineage3.1;lineage4 1
lineage4.3.2.1 1
lineage4.3.4.2.1 1
lineage1.1.3.1 1
La1;lineage4.1.2 1
spoligotype Counts
spoligotype Count
None 231
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR3797046 HR-TB lineage4.9 None
SRR28868888 Other lineage1.1.3.2 None
SRR6044819 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR373947 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR12708416 Sensitive None
ERR3797070 Other lineage4.9 None
ERR736831 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675221 Other lineage4.9 None
ERR9787197 Other None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4797313 Sensitive lineage2.2.1 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR4818347 Other lineage4.1.2 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR1180137 Other lineage2.2.1 None
SRR1173778 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR363453 Sensitive lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12708384 Sensitive lineage4.9 None
ERR245758 Other lineage4.9.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR9970980 HR-TB lineage4.1.2 None
SRR20969708 HR-TB lineage2.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR18910194 HR-TB lineage2.2.2 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR373945 Sensitive lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR1063883 HR-TB lineage4.9 None
SRR6789626 Other None
ERR4816999 Other None
ERR363449 Sensitive lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4769450 Other lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR990545 Other lineage3 None
ERR3804169 HR-TB lineage4.1.3 None
SRR12708372 Sensitive lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR4800341 Other lineage3 None
SRR5341453 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR702406 Other lineage2.1 None
ERR9786611 HR-TB lineage4.1.3 None
SRR6045706 Sensitive lineage4.9 None
ERR4769452 Other lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR6045892 Sensitive lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR1184381 MDR-TB None
SRR5341412 Pre-XDR-TB lineage3 None
SRR6789621 Other lineage4.9 None
SRR28119752 Other lineage4.9 None
ERR369159 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR3283055 HR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR4819781 Other lineage2.2.1 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR363500 Sensitive lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786569 Other lineage4.8 None
ERR323066 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR1196583 Other lineage4.9 None
SRR5341373 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR18213713 HR-TB None
SRR1175496 Sensitive lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR369163 Sensitive lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR369158 Other lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR363498 Sensitive lineage4.9 None
ERR4817896 HR-TB lineage2.2.1 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR6045053 Other lineage4 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046046 Other lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
SRR20969731 Other lineage2.2.1 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR349300 Sensitive lineage4.9 None
ERR108125 RR-TB lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341345 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR29051077 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR9786617 Other lineage4.1.1.1 None
ERR4769474 HR-TB lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR400326 Other lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR176793 Other lineage4.1.1.1 None
SRR3675236 Other None
ERR363499 Sensitive lineage4.9 None
SRR1165699 Other lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR1172728 RR-TB La3 None
SRR1173400 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR363447 Other lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR349266 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR29096174 Sensitive La1.7;lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR3804155 Other lineage4.1.2.1 None
ERR2513283 Sensitive lineage5.1.4 None
SRR11662690 HR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR25827682 Other None
ERR234659 Other None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
ERR363446 Sensitive lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR9786604 Other None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR3675477 Sensitive lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR29096203 Sensitive lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR9787165 Other lineage6.1.3 None
SRR1172951 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811030 Sensitive lineage4.9 None
ERR752229 Other lineage4.5 None
ERR369162 Other lineage4.9 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR3675270 Other lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR2514327 HR-TB lineage4.8 None
SRR12708409 HR-TB lineage4.3.3 None
ERR9787139 Other lineage6.3.1 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR1183049 RR-TB lineage2.2 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR1791747 Other La1.8.1 None
ERR6358979 Other lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR9896144 Other lineage3 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR323107 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2027263 Other lineage4 None
ERR2446566 Other lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR26159043 Other lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR5341323 Sensitive lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045371 Other lineage4.9 None
ERR11465015 Sensitive lineage4.3.4.2.1 None
ERR363509 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363502 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None