Rv2428 - c.525A>C


Drug resistance types
38 Sensitive 1 RR-TB 29 HR-TB 12 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 26 Other
lineage Counts
lineage Count
La1.2.BCG 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 3
La1.7;lineage4.9 1
lineage4 3
lineage4.9 56
lineage4.3.2;lineage4.9 1
lineage4.2;lineage4.9 3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
La2;lineage4.9 2
La1.7.1;La1.7.X-unk4 1
La1;lineage2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1;lineage4.9 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.1;lineage4.9 1
M.canetti;lineage4.9;lineage9 1
La1.7.X-unk4;lineage4.9 1
lineage2.1;lineage4.9 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 2
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage1.1.1;lineage4 1
1
lineage2.2.1 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.5 1
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.2 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;lineage4.9 1
lineage3.1.2.2 1
La1.7.1;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La1;lineage4.1.2 1
spoligotype Counts
spoligotype Count
None 106
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4798262 HR-TB La1.2.BCG None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR4769442 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR363500 Sensitive lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR369162 Other lineage4.9 None
ERR363453 Sensitive lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR363498 Sensitive lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR363506 Sensitive lineage4.9 None
ERR363490 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR400326 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR363502 Other lineage4.9 None
ERR373947 Other lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR6045359 Sensitive lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR369163 Sensitive lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR5535933 Other lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR349265 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR4178226 Sensitive lineage4 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR349299 Other lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR1063862 HR-TB lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR1063849 HR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR363447 Other lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR349296 Sensitive lineage4.9 None
SRR5341456 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR987722 MDR-TB None
ERR4797313 Sensitive lineage2.2.1 None
ERR1063858 HR-TB lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR369158 Other lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR363421 Sensitive lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR3675387 Other lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR6045706 Sensitive lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None