Rv2428 - c.525A>C


Drug resistance types
40 Sensitive 1 RR-TB 29 HR-TB 12 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 26 Other
lineage Counts
lineage Count
lineage4 3
lineage4.9 58
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.2;lineage4.9 3
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 3
lineage2.2 1
La2;lineage4.9 2
lineage2.1;lineage4.9 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
lineage2.1;lineage4.1.4;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La1.7.1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.2.BCG 1
1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.5 1
M.canetti;lineage4.9;lineage9 1
La2;lineage2.2 1
La1.6;La3;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
La1;lineage2;lineage4.9 1
lineage4.2;lineage4.8.1;lineage4.9 2
La1;lineage4.9 1
lineage3 1
La1;lineage4.1.2 1
lineage1.1.1;lineage4 1
La1.7;lineage4.9 1
lineage2.2.1 1
lineage4.3.2;lineage4.9 1
lineage4.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 108
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR6865502 Sensitive lineage4 None
SRR6045219 HR-TB lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR363509 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4.9 None
ERR373947 Other lineage4.9 None
ERR349296 Sensitive lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR349330 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
ERR363453 Sensitive lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR363498 Sensitive lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR20969708 HR-TB lineage2.2 None
ERR323039 HR-TB La2;lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR363506 Sensitive lineage4.9 None
ERR363490 Sensitive lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR349265 Other lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR400326 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR363502 Other lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR363447 Other lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR11662690 HR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR987722 MDR-TB None
ERR363446 Sensitive lineage4.9 None
ERR363500 Sensitive lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR369163 Sensitive lineage4.9 None
ERR369158 Other lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR5535933 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR363421 Sensitive lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR349299 Other lineage4.9 None
ERR4596910 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR1063849 HR-TB lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR1183111 HR-TB lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR4797313 Sensitive lineage2.2.1 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR369162 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
ERR363437 Sensitive lineage4.9 None