Rv1221 - c.345G>A
Drug resistance types
18 Sensitive
1 RR-TB
3 HR-TB
10 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 19 |
| lineage4.1;lineage4.9 | 1 |
| lineage2.2.1 | 4 |
| lineage2.2.1;lineage4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.1.2.1 | 6 |
| La1;lineage2;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage4.5 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage1.1.1;lineage4 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 48 |
Geographic prevalence
Country level data for this variant is available for 6 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4769474 | HR-TB | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR6398007 | Other | lineage4.1.2.1 | ca | SRR3675455 | Sensitive | lineage4.9 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR5311079 | MDR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | SRR6397997 | Sensitive | lineage4.1.2.1 | ca | SRR3675387 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR6397975 | Sensitive | lineage4.1.2.1 | ca | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6398077 | Sensitive | lineage4.1.2.1 | ca | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR6397968 | Sensitive | lineage4.1.2.1 | ca | SRR6398008 | Sensitive | lineage4.1.2.1 | ca | SRR6046245 | Other | lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR16156817 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR3675522 | Other | lineage4.9 | None |
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