Rv0529 - c.540C>T
Drug resistance types
14 Sensitive
0 RR-TB
7 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 17 |
| M.canetti;lineage4.9 | 2 |
| lineage1.1.1;lineage4 | 1 |
| La1.2.BCG | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage4 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.4.1.2 | 1 |
| lineage2.2.1 | 1 |
| lineage5.1.4 | 1 |
| lineage1;lineage4.9 | 1 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| lineage4.5 | 1 |
| La2;lineage4.9 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage3.1.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 36 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341323 | Sensitive | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR4798262 | HR-TB | La1.2.BCG | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675441 | Other | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR176651 | Other | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None |
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