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SRA data
Rv0529
- c.540C>T
Drug resistance types
14 Sensitive
0 RR-TB
7 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
17
M.canetti;lineage4.9
2
lineage1;lineage4.9
1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
1
lineage4.5
1
La2;lineage4.9
1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3
1
lineage3.1.2.2
1
La1.2.BCG
1
lineage4
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
36
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR11252558
Other
lineage4.6.3;lineage4.9
None
ERR176651
Other
lineage4.9
None
ERR176778
HR-TB
lineage4.9
None
ERR176779
HR-TB
lineage4.9
None
ERR181887
Other
lineage4.9
None
ERR2512770
Sensitive
lineage4.2.1
None
ERR2513283
Sensitive
lineage5.1.4
None
ERR323039
HR-TB
La2;lineage4.9
None
ERR323056
HR-TB
lineage4.4.1.2
None
Showing 1 to 10 of 36 entries
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