Rv3696c - c.1200G>C
Drug resistance types
16 Sensitive
0 RR-TB
9 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
15 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 3 |
| lineage4.5 | 1 |
| lineage4.9 | 25 |
| lineage4.1.2.1 | 1 |
| La3;lineage4.9 | 3 |
| lineage4.7 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.8 | 1 |
| M.canetti;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| lineage1;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 44 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9971114 | Other | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR4816172 | Sensitive | lineage4.7 | gb | ERR6359082 | Other | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None | SRR3675387 | Other | lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None |
|---|
