Rv0006 - c.357A>G
Drug resistance types
89 Sensitive
5 RR-TB
176 HR-TB
19 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
115 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 19 |
| lineage4 | 72 |
| 164 | |
| lineage4.3.4.2.1 | 3 |
| lineage4.9 | 49 |
| lineage4.3.4.1 | 2 |
| La1 | 2 |
| La1.8.1 | 6 |
| lineage4.1.3 | 2 |
| lineage1.1.2 | 2 |
| lineage3 | 5 |
| lineage2.2.1 | 13 |
| lineage3.1.2 | 1 |
| lineage2.2 | 6 |
| lineage1.2.1.2.1 | 1 |
| lineage4.5 | 2 |
| lineage4.6.1.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.3.4 | 2 |
| lineage4.3.2 | 2 |
| lineage4.6.2.2 | 3 |
| lineage5.2 | 2 |
| lineage4.1 | 4 |
| lineage4.8 | 12 |
| lineage4.3.4.2 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage6 | 2 |
| lineage6.3.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage2.2.1.1 | 3 |
| lineage7;lineage2.2.1.2 | 1 |
| La1.7.1 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage1.1.1 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.9;lineage3.1.2.1 | 1 |
| lineage4.7 | 1 |
| lineage4.1.2 | 3 |
| lineage4.2.1 | 1 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| La2 | 1 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 409 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR323107 | Other | lineage4 | None | ERR1034652 | Other | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034634 | HR-TB | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | ERR1035157 | Other | lineage4.9 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1063857 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283014 | HR-TB | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283025 | HR-TB | None | ERR3283028 | Other | None | ERR3283024 | Other | None | ERR3283043 | Other | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283051 | Other | lineage4.9 | None | ERR3283057 | HR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283055 | HR-TB | None | ERR369162 | Sensitive | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4 | None | ERR5336148 | Other | None | ERR349299 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR3468544 | HR-TB | None | ERR349300 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797017 | Other | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797043 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797044 | Other | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797058 | Other | lineage4.9 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR3797069 | Other | None | ERR3797063 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR3797087 | Sensitive | lineage4 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR400336 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR405209 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4188247 | HR-TB | None | ERR4188350 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797264 | Sensitive | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4797313 | HR-TB | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4798431 | HR-TB | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4798504 | Other | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4800341 | Other | lineage3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR6336803 | Other | lineage1.2.1.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4811493 | HR-TB | None | ERR6358979 | Other | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358837 | HR-TB | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6358991 | HR-TB | None | ERR6359045 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR6866410 | Sensitive | None | ERR6866639 | Other | None | ERR702406 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736848 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736839 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9117709 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9117805 | Other | lineage4.3.2 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9119669 | HR-TB | None | ERR9786440 | Other | lineage4.1 | None | ERR9634264 | Sensitive | lineage4.8 | None | ERR9634265 | Sensitive | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9786515 | Other | lineage4.1.2.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786569 | Other | lineage4.8 | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9787165 | Other | lineage6 | None | SRR1162740 | Other | lineage4.1.2.1 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9787197 | Other | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR10808805 | Sensitive | None | SRR10809074 | Sensitive | lineage4 | None | SRR11462861 | Other | La1.8.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1174897 | HR-TB | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR12416824 | HR-TB | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR13861266 | Sensitive | lineage4.9 | None | SRR13861305 | Other | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861322 | Other | lineage4.9 | None | SRR13861332 | Other | lineage4.9 | None | SRR13861368 | RR-TB | lineage4.9 | None | SRR13861376 | Other | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861534 | Other | lineage4.9 | None | SRR13861549 | RR-TB | lineage4.9 | None | SRR15014682 | MDR-TB | lineage4.8 | None | SRR14782405 | HR-TB | None | SRR13861720 | Other | lineage4.9 | None | SRR14164380 | HR-TB | lineage4.8 | None | SRR14801749 | Sensitive | None | SRR1640750 | HR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR17832802 | HR-TB | lineage3 | None | SRR1791696 | Other | La1.8.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19303884 | HR-TB | None | SRR8692893 | Other | lineage4.9 | None | SRR8692790 | RR-TB | lineage4 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | ERR11082098 | Sensitive | lineage4.8 | None | SRR8692905 | HR-TB | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692818 | Other | lineage4.9 | None | SRR8692887 | Other | None | SRR26399239 | Sensitive | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR26159035 | Sensitive | lineage4.9 | None | ERR4815604 | HR-TB | None | SRR6325445 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR176779 | HR-TB | None | ERR176778 | HR-TB | None | SRR3675465 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675486 | HR-TB | None | ERR2199884 | Sensitive | lineage4.8 | de | SRR3675221 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR161033 | HR-TB | None | SRR3675488 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | SRR3675501 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675222 | Other | None | SRR3675265 | Other | lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR1750908 | Sensitive | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675270 | HR-TB | None | SRR3675279 | Other | None | SRR3675283 | Sensitive | lineage4.9 | None | ERR176751 | HR-TB | None | ERR176651 | HR-TB | None | ERR176740 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675311 | Other | None | ERR4815752 | Other | lineage4.9 | None | SRR3675510 | Other | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4816999 | Other | None | ERR212138 | HR-TB | lineage4 | None | SRR3675545 | HR-TB | None | ERR4817037 | Other | lineage4.9 | None | ERR212121 | HR-TB | None | SRR3675558 | HR-TB | None | SRR3675572 | Other | None | ERR212125 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | ERR4816466 | HR-TB | None | ERR4816656 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4816585 | Other | lineage2.2 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR3276080 | Sensitive | lineage4.8 | nl | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR7496472 | Other | None | ERR4819051 | Other | lineage4 | None | ERR2446566 | Other | lineage4.1 | None | ERR234659 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818021 | Other | La1.8.1 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818929 | HR-TB | None | ERR4819280 | Sensitive | lineage4 | None | ERR4818615 | Other | None | SRR5007188 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5152915 | Sensitive | lineage4.8 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341456 | Other | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | SRR5341432 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | ERR2514390 | Sensitive | lineage4.9;lineage3.1.2.1 | None | ERR4819932 | Other | lineage4.7 | None | SRR5341313 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341333 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR5341315 | Sensitive | None | ERR4821053 | Other | lineage3 | None | SRR5341470 | HR-TB | None | ERR1465938 | Sensitive | lineage4.8 | dz | ERR2693239 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | SRR6045503 | HR-TB | None | SRR6045519 | HR-TB | None | SRR23339986 | Sensitive | lineage4.8 | None | ERR278594 | HR-TB | None | ERR2679270 | HR-TB | lineage4.1.2 | None | ERR2693227 | Other | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045555 | HR-TB | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6325444 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6045233 | HR-TB | None | SRR6046066 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045399 | Other | None | SRR6046245 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046305 | Other | lineage4.9 | None | SRR6045892 | Sensitive | None | SRR6044780 | Other | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6044855 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6045010 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6046362 | HR-TB | None | SRR6046397 | Other | None | ERR4830353 | Other | None | SRR6046299 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046521 | Other | lineage4.4.1.1 | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046644 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6046878 | HR-TB | lineage4 | None | ERR3077978 | Other | lineage1.1 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6480491 | Sensitive | lineage4.8 | None | SRR6511621 | HR-TB | None | SRR6325442 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4831117 | HR-TB | None | ERR294266 | HR-TB | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR294248 | HR-TB | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502524 | HR-TB | La2 | None | ERR323036 | HR-TB | None | SRR8217918 | HR-TB | None | ERR502532 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323038 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7496509 | Other | None | SRR7496517 | Other | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323039 | HR-TB | None | ERR323041 | HR-TB | None | ERR323045 | HR-TB | None | ERR323053 | HR-TB | None | ERR323063 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323043 | HR-TB | None | ERR323055 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None |
|---|
