Rv0006 - c.1734G>C


Drug resistance types
58 Sensitive 15 RR-TB 79 HR-TB 46 MDR-TB 4 Pre-XDR-TB 2 XDR-TB 88 Other
lineage Counts
lineage Count
lineage2.1;lineage4.9;lineage6.3 4
lineage4.9 93
La3;M.canetti;lineage4.9 2
La3;lineage2.1;lineage6.3 1
lineage4.1.1.1 1
M.canetti;lineage2.1;lineage4.9 25
La3;M.canetti;lineage2.1;lineage4.9 11
lineage4.1;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
La3;M.canetti;lineage2.2.1 1
La3;lineage2.2.1 1
La3;lineage2.1;lineage4.9 1
lineage4.9.1 1
lineage4.1.2.1 9
M.canetti;lineage2.2 3
lineage2.2.2 1
lineage4 6
M.canetti;lineage2.1;lineage4.9;lineage6.3 6
La1.7.1;La1.7.X-unk4 1
lineage3 2
lineage4.9;lineage9 2
lineage2.1;lineage4.1.1.1;lineage6.3 2
lineage4.3.3 4
lineage4.8 2
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage4.3.2.1 1
lineage2.1 2
La1.7;lineage4.2 1
La3;M.canetti;lineage3.1 1
M.canetti;lineage2.1 1
8
lineage2.2.2;lineage4 1
lineage4.9;lineage7 1
lineage4.3.2;lineage4.9 1
La3;M.canetti;lineage4.8;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 2
lineage4.5 2
lineage2.2 2
La3;lineage2 1
M.canetti;lineage2.1;lineage4 1
M.canetti;lineage2.2.2;lineage6.2 2
La3;lineage1.1.2 1
La3;lineage2.1;lineage4.9;lineage6.3 4
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage2.2.1 7
lineage4.1.1.3 1
M.canetti;lineage4.9 2
lineage2.2.1;lineage6.3 1
lineage3.1.2.2 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.1;lineage4.9 6
M.canetti;lineage2.1;lineage4.1.2.1 1
La2;lineage4.9;lineage9 1
La1.7.1;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
La3;lineage4.8 1
lineage6.1.1 2
lineage4.6.2.2 1
lineage1.1 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 3
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage4.2.1 1
lineage4.2.1.1;lineage4.3.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.3.4 1
La1.7.X-unk4;lineage4.9 1
lineage2.2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage3.1 1
lineage2.1;lineage4.3.2 1
La3;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La2;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La3;lineage2.2.2 1
lineage4.6.3;lineage4.9;lineage6.3 1
lineage1;lineage4.9 2
M.canetti;lineage4.3.1;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.1.2.1.1 1
lineage5.2 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 1
lineage2.1;lineage2.2;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
lineage1.1.1;lineage4 1
M.canetti;lineage2.1;lineage3 1
lineage4.6.3;lineage4.9 1
La1.7.1 1
lineage4.1.1.3;lineage4.9 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
spoligotype Counts
spoligotype Count
None 292
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
ERR369162 Other lineage4.9 None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR29097026 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
SRR3675580 Sensitive lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR5311083 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR245758 Other lineage4.9.1 None
ERR4178309 Other lineage4.1.2.1 None
ERR349300 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR6045526 Other lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
SRR18910194 HR-TB lineage2.2.2 None
ERR2027263 Other lineage4 None
SRR6046897 Sensitive lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR4798504 RR-TB lineage3 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR3283016 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR7496471 Sensitive lineage4 None
SRR3675248 Other lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR11349186 MDR-TB lineage4.3.3 None
SRR29096150 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR363499 Sensitive lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR13285191 Sensitive lineage4.9 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR363445 Other lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR6045050 Sensitive lineage4.3.2.1 None
ERR473332 Other lineage4.9 None
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR12416840 MDR-TB lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR6046259 Sensitive lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
SRR23961559 Other La1.7;lineage4.2 None
ERR5908228 RR-TB lineage4.3.3 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
ERR323041 HR-TB M.canetti;lineage2.1 None
ERR363456 Sensitive lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR987722 MDR-TB None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR369159 Sensitive lineage4.9 None
SRR29093105 Other lineage2.2.2;lineage4 None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2517475 Other lineage4 None
SRR1162864 Other lineage4.1.2.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1180226 HR-TB lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
SRR21732980 Other lineage4.3.3 None
ERR1063858 HR-TB lineage4.9 None
ERR038268 HR-TB La3;M.canetti;lineage4.8;lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR26399239 Sensitive lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR4810624 MDR-TB lineage2.2 None
SRR20969677 HR-TB La3;lineage2 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR369158 Other lineage4.9 None
ERR363498 Sensitive lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311100 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
SRR1162740 Other lineage4.1.2.1 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR363490 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR323040 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4799547 HR-TB lineage2.2.1 None
ERR363421 Sensitive lineage4.9 None
ERR4816551 HR-TB lineage4.1.1.3 None
ERR736839 HR-TB M.canetti;lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR349265 Other lineage4.9 None
ERR400345 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR6865502 Sensitive lineage4 None
SRR6789626 Other None
ERR4798648 MDR-TB lineage3.1.2.2 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR3675481 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675260 Sensitive lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR363509 Sensitive lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR5311089 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR1165699 Other lineage4.9 None
SRR6045290 RR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675387 Other lineage4.9 None
ERR4188350 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR12015083 Other La3;lineage4.8 None
SRR671723 RR-TB lineage2.2.1 cn
ERR323043 Other lineage2.1;lineage4.9 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3799304 Other lineage6.1.1 None
ERR4799513 HR-TB lineage2.2 None
ERR373946 Sensitive lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR3077978 RR-TB lineage1.1 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR6046485 Other lineage4.9 None
ERR323038 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
ERR9786642 Other lineage4.1.2.1 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR28119805 Other lineage4.9 None
ERR234659 Other None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR4797313 Sensitive lineage2.2.1 None
SRR6044815 Other lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR3675487 Other M.canetti;lineage4.9 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
SRR1640750 Other None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR3675444 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR13285192 Sensitive lineage4.9 None
ERR323060 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675232 Other lineage4.1.2.1 None
ERR2512770 Sensitive lineage4.2.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
SRR29096410 Other lineage4.9 None
ERR4407463 HR-TB None
SRR29016780 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR1165506 Other lineage4.1.2.1 None
SRR6046611 Sensitive lineage4.9 None
ERR363453 Sensitive lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR9787014 Other lineage6.1.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR2693242 RR-TB lineage2.1;lineage4.9 None
ERR369151 Other lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675265 Other lineage4 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
SRR26399973 Other La3;lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4821053 RR-TB lineage3 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR2693228 RR-TB lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR13245558 MDR-TB La3;lineage2.2.2 None
ERR363479 Sensitive lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341345 Sensitive lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR9786444 Sensitive lineage4.8 None
ERR181887 Other lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119138 RR-TB M.canetti;lineage4.3.1;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR6865513 Other lineage4.1.2.1 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR349299 Other lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
SRR3675515 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
ERR4812155 Other lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
SRR3675229 Sensitive lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR363502 Other lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR363447 Other lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
SRR3675494 RR-TB lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR373947 Other lineage4.9 None
ERR3283017 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.3.1;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR212125 HR-TB lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR349296 Sensitive lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR9119500 MDR-TB lineage5.2 None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR2514692 Other None
SRR6789621 Other lineage4.9 None
ERR473314 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR349264 Sensitive lineage4.9 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786671 Other None
SRR12142341 HR-TB lineage2.1 None
ERR176778 HR-TB lineage4.9 None
ERR363446 Sensitive lineage4.9 None
SRR7240492 HR-TB La1.7.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR9786604 Other None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045217 Sensitive lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR176651 Other lineage4.9 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None