Rv0006 - c.1734G>C
Drug resistance types
82 Sensitive
3 RR-TB
115 HR-TB
14 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
66 Other
lineage Counts
| lineage | Count |
|---|---|
| 104 | |
| lineage4.9 | 45 |
| lineage4 | 59 |
| lineage4.3.2.1 | 1 |
| lineage4.2.1 | 2 |
| lineage4.1.2.1 | 11 |
| lineage2.2.1 | 10 |
| lineage2.2 | 6 |
| lineage1.1 | 1 |
| lineage3.1 | 2 |
| lineage5.2 | 2 |
| La2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage6.1.1 | 2 |
| La1.2 | 1 |
| lineage2 | 2 |
| lineage3 | 2 |
| lineage3.1.2 | 1 |
| lineage4.8 | 2 |
| lineage4.8;La3 | 1 |
| lineage4.3.3 | 4 |
| lineage4.5 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.3.4 | 1 |
| lineage1.1.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1 | 3 |
| lineage4.9;La3 | 1 |
| lineage3;lineage2.1 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.2;La1.7 | 1 |
| lineage4.1.1 | 2 |
| lineage3.1.2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.9;lineage4.6.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 285 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR278594 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046133 | HR-TB | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6044790 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6045217 | Other | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045327 | HR-TB | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6325447 | HR-TB | None | SRR6046802 | Other | lineage4 | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4831546 | HR-TB | lineage2.2 | None | SRR6325442 | HR-TB | None | ERR3077978 | Other | lineage1.1 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4872094 | MDR-TB | lineage5.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831719 | MDR-TB | lineage2.2.1 | None | ERR4831638 | Sensitive | None | ERR4831739 | MDR-TB | lineage2.2.1 | None | ERR5311081 | HR-TB | None | ERR294248 | HR-TB | None | SRR6789626 | Other | None | ERR502524 | HR-TB | La2 | None | ERR502943 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323036 | HR-TB | None | ERR323038 | HR-TB | None | SRR7496471 | Sensitive | None | ERR5311090 | HR-TB | None | ERR323041 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323039 | HR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323045 | HR-TB | None | ERR323043 | HR-TB | None | ERR323053 | HR-TB | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR3445503 | HR-TB | None | ERR1034634 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283017 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1035157 | Other | lineage4.9 | None | ERR3468544 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797083 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797016 | HR-TB | None | ERR3799304 | Other | lineage6.1.1 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4407463 | HR-TB | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4188350 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798431 | HR-TB | None | ERR4798504 | Other | lineage3 | None | ERR4797313 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799171 | Pre-XDR-TB | lineage4.8 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR12015083 | Other | lineage4.8;La3 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4812155 | Sensitive | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR702404 | HR-TB | None | ERR736839 | Other | None | ERR736875 | HR-TB | lineage4 | None | ERR736874 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR6359045 | HR-TB | None | ERR245758 | Other | lineage4.9.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736865 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9119500 | MDR-TB | lineage5.2 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786604 | Other | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786671 | Other | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR987722 | HR-TB | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1173384 | Other | lineage4 | None | SRR1172951 | Other | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1169194 | Other | None | SRR1172310 | HR-TB | None | SRR1173400 | Other | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1173788 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1174897 | HR-TB | None | SRR1175508 | Other | lineage4.9 | None | SRR1175074 | MDR-TB | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR1184294 | HR-TB | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184380 | HR-TB | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR12142341 | HR-TB | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR13423544 | Other | lineage4.5 | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR13837824 | Other | lineage4.9 | None | SRR13861566 | Other | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR15368973 | Other | None | SRR16157123 | Other | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675477 | Other | lineage4.9 | None | SRR6325445 | HR-TB | None | SRR3675482 | HR-TB | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR671723 | RR-TB | lineage2.2.1 | cn | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR23961559 | Other | lineage4.2;La1.7 | None | ERR176779 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675232 | Other | lineage4.1.2.1 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675265 | Other | lineage4 | None | SRR3675292 | Sensitive | lineage4 | None | ERR181887 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None | ERR176651 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675522 | Other | None | SRR3675542 | Other | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR2027263 | Other | lineage4 | None | SRR3675545 | HR-TB | None | ERR4816180 | Sensitive | lineage3.1.2.1 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675558 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3742665 | HR-TB | None | SRR3675383 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | SRR3675574 | HR-TB | None | ERR4816466 | HR-TB | None | ERR234659 | HR-TB | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2229143 | Other | lineage4.1.1 | None | SRR5341396 | Other | lineage4 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4820580 | Sensitive | lineage4.9;lineage4.6.2 | None | SRR5341323 | Sensitive | lineage4 | None | ERR2514692 | Other | None | SRR5341302 | HR-TB | None | ERR2517475 | Other | lineage4 | None | ERR4821053 | Other | lineage3 | None | SRR5341470 | HR-TB | None | ERR2693239 | HR-TB | None |
|---|
