lineage | Count |
---|---|
lineage4.9 | 104 |
lineage4.8;lineage4.9 | 2 |
lineage4.3.2.1 | 3 |
lineage1;lineage4.9 | 1 |
lineage4.2.1 | 1 |
lineage1.1.1 | 1 |
La1.7;lineage4.9;lineage6 | 1 |
lineage2.2.1 | 12 |
lineage4.5 | 1 |
lineage2.2 | 1 |
1 | |
lineage4.1.1.3 | 1 |
lineage4.8 | 1 |
lineage4.1.2.1 | 1 |
La1.7;lineage4.9 | 2 |
La1;lineage4.9 | 2 |
La1.7.1;lineage4.9 | 1 |
lineage1.1.3.1 | 1 |
La1.7.1;La1.7.X-unk4;lineage7 | 1 |
lineage1.1.2 | 1 |
lineage5.1.4 | 1 |
lineage4.3.3 | 3 |
lineage4.6.2.2 | 1 |
lineage4 | 5 |
lineage4.2.1.1;lineage4.3.3 | 1 |
La2;lineage2.2 | 1 |
La2;lineage4.9 | 1 |
lineage4.1.1.2 | 1 |
La1.7.1;La1.7.X-unk4 | 1 |
lineage1.2.2.2 | 1 |
La1.2.BCG;lineage4.9 | 1 |
lineage3 | 3 |
lineage3;lineage4.9 | 1 |
La1.2.BCG | 2 |
lineage4.9;lineage7 | 1 |
lineage4.1;lineage4.9 | 1 |
lineage2.2.1;lineage4 | 1 |
lineage4.1.2 | 1 |
La1.8.1 | 1 |
lineage2.2.1.1 | 1 |
La1;lineage4.1.2 | 1 |
La1.7;lineage4.9;lineage7 | 1 |
spoligotype | Count |
---|---|
None | 170 |
ID | Drug resistance | Lineage | Country iso2 | ERR736831 | Other | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4810624 | MDR-TB | lineage2.2 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR502511 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR473332 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR3675522 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR6359069 | Sensitive | lineage4.9 | None | SRR7496471 | Sensitive | lineage4 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR1915481 | Other | La1.2.BCG;lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR323037 | Other | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR867566 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR1915487 | Other | La1.2.BCG | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR926165 | Sensitive | lineage4.9 | None | SRR6046385 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR28351347 | Other | lineage3 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1791747 | Other | La1.8.1 | None | ERR6358979 | Other | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR736848 | Other | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR926163 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | SRR10808490 | Sensitive | lineage2.2.1.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR1915485 | Other | La1.2.BCG | None | ERR736834 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR6045892 | Sensitive | lineage4.9 | None |
---|