EBG00000313339 - n.175C>T
Drug resistance types
98 Sensitive
19 RR-TB
39 HR-TB
21 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
82 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 5 |
| lineage4.9 | 137 |
| lineage6.1.3 | 1 |
| lineage4.6.2.2 | 2 |
| lineage2.2.1 | 20 |
| lineage4.1.2 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.8 | 6 |
| lineage4.1.2.1 | 12 |
| lineage3 | 5 |
| lineage4.3.4.2.1 | 9 |
| lineage4.8.1 | 1 |
| lineage4.4.1.1 | 2 |
| La1.3 | 5 |
| lineage2.2.1;lineage4 | 2 |
| lineage4.1.1.3 | 3 |
| La1.7;lineage4.9 | 2 |
| lineage4.3.3 | 4 |
| lineage1.1.1;lineage4 | 1 |
| 4 | |
| lineage2.2 | 1 |
| lineage4.3.4.1 | 3 |
| lineage4.4.1.1.1 | 2 |
| lineage4.3.2.1 | 4 |
| lineage4.6.1.2 | 3 |
| lineage4.1.3 | 1 |
| lineage1.2.2.2 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.6.1.1 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| La1.7.1 | 1 |
| lineage2.1 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| lineage4.5 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1.1.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2;lineage4 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 265 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3275450 | Other | lineage4 | None | ERR363499 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR363421 | Other | lineage4.9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2024953 | MDR-TB | lineage2.2.1 | cn | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR9786569 | Other | lineage4.8 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6046141 | Other | lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | ERR2513259 | Other | lineage3 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR176741 | Other | lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR21576654 | RR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR4818851 | RR-TB | lineage4.4.1.1 | None | ERR9786627 | Other | lineage4.1.2.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | ERR4769514 | Other | La1.3 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR400345 | Other | lineage4.9 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR11342660 | MDR-TB | lineage2.2.1 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4769436 | Other | La1.3 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | ERR4821704 | Other | lineage4.3.3 | None | ERR4812155 | Other | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR1140753 | RR-TB | lineage4.3.4.2.1 | None | ERR4769555 | Sensitive | La1.3 | None | SRR3675266 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR363479 | Other | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR6045503 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR363446 | Other | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR9787197 | Other | None | ERR349300 | Other | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR363449 | Other | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1181403 | Other | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR373945 | Other | lineage4.9 | None | ERR4821172 | RR-TB | lineage4.9 | None | ERR867566 | Other | lineage4.9 | None | SRR1175472 | RR-TB | lineage4.3.4.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | ERR4769408 | Other | La1.3 | None | ERR369151 | Other | lineage4.9 | None | SRR1181256 | Other | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR228175 | Sensitive | lineage3 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | ERR736837 | Pre-XDR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR373946 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SAMN02380990 | MDR-TB | lineage4.6.1.2 | None | ERR4816470 | HR-TB | lineage3 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR1175508 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR4816198 | Sensitive | lineage4.1.3 | None | ERR502473 | RR-TB | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | ERR349299 | Other | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4769552 | Sensitive | La1.3 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR369160 | Sensitive | lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR363502 | Other | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR363453 | Other | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR11081258 | Other | lineage4.8 | None | ERR363447 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR3675260 | Sensitive | lineage4.9 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR369159 | Other | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR1035157 | Other | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR6046385 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | ERR502481 | RR-TB | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR6045832 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR702406 | Other | lineage2.1 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR6865502 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR11662694 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR4811031 | Other | lineage4.5 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR4820030 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1172717 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR867540 | MDR-TB | lineage2.2.1 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR363490 | Other | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR4769516 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR9786440 | Other | lineage4.1 | None | SRR1180391 | Sensitive | lineage4.9 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | SRR1180413 | Sensitive | lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR363500 | Other | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1173770 | Other | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1175491 | MDR-TB | lineage4.3.4.1 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR2100532 | Sensitive | lineage3 | None | ERR349266 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | ERR9786604 | Other | None | SRR12708416 | Sensitive | None | ERR4831848 | HR-TB | lineage4.2.2 | vn | SRR9971114 | Other | lineage2.2.1 | None | SRR1180345 | Other | lineage4.9 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None |
|---|
