EBG00000313339 - n.175C>T


Drug resistance types
147 Sensitive 27 RR-TB 49 HR-TB 26 MDR-TB 15 Pre-XDR-TB 0 XDR-TB 89 Other
lineage Counts
lineage Count
lineage2.2.1 23
La1.8.1 4
28
lineage4.9 105
lineage4 70
lineage3 15
lineage4.1.2.1 18
La1.3 8
lineage4.9;La1.3 2
lineage4.2.2 1
lineage4.5 2
lineage2.2.1.2 1
lineage2.2 2
lineage4.3.4.2.1 8
lineage1.1.3.1 2
lineage4.8 10
lineage4.1 3
lineage4.6.2.2 3
lineage6 1
lineage4.6.1.2 5
lineage4.4.1.1;lineage4.1.2.1 1
La1.6 1
lineage4.4.1.1.1 2
lineage4.9;lineage2.2 1
lineage2 1
lineage4.2.2.1 1
La1.7.1 1
lineage4.1.1.3 1
lineage4.1.1 4
lineage4.9;lineage4.8.1;lineage4.1.1 1
lineage1.2.1.1 1
lineage4.1.1.2 1
lineage2.1 1
lineage4.1.3 1
lineage4.3.3 4
lineage4.3.4.2 1
lineage1 2
lineage3.1.3 1
lineage4.4.1.1 2
lineage5.1.4 1
lineage4.2.1 3
lineage4.6 1
lineage4.3.2.1 2
La3 1
lineage4.3.1.1 1
lineage5.1.1 1
lineage4.1.2 1
lineage4.6.1.1 1
lineage4.8.1 1
lineage4.3.4.1 1
spoligotype Counts
spoligotype Count
None 353
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR1023502 MDR-TB lineage2.2.1 None
ERR3439441 Other La1.8.1 None
ERR3283032 HR-TB None
ERR3283040 HR-TB None
ERR1035157 Other lineage4.9 None
ERR1063855 Other lineage4 None
ERR108471 HR-TB lineage4 None
ERR114423 HR-TB lineage3 None
ERR3283025 HR-TB None
ERR3283030 HR-TB lineage4.9 None
ERR3445501 HR-TB None
ERR349266 Sensitive lineage4.9 None
ERR3445502 HR-TB lineage4 None
ERR3468488 RR-TB La1.8.1 None
ERR349265 Sensitive lineage4 None
ERR349264 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR349299 Sensitive lineage4 None
ERR349298 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369157 Sensitive lineage4.9 None
ERR363490 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR369159 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR369162 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR3797015 HR-TB None
ERR373947 Sensitive lineage4 None
ERR400320 Sensitive lineage4 None
ERR3797080 HR-TB lineage4.9 None
ERR3797019 Other La1.8.1 None
ERR3797086 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR4178309 Other lineage4.1.2.1 None
ERR400336 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR4178226 Sensitive lineage4 None
ERR473367 Sensitive lineage4.9 None
ERR473323 HR-TB lineage4.9 None
ERR473334 HR-TB lineage4.9 None
ERR4188121 Other La1.8.1 None
ERR4769406 Other lineage4.9 None
ERR4769408 Other La1.3 None
ERR4769417 Pre-XDR-TB lineage4.9 None
ERR4769444 HR-TB lineage4.9 None
ERR4769436 Other La1.3 None
ERR4769442 HR-TB lineage4 None
ERR4769506 Sensitive La1.3 None
ERR4769512 Sensitive lineage4.9 None
ERR4769516 Other La1.3 None
ERR4769518 Sensitive lineage4.9 None
ERR4769514 Other La1.3 None
ERR4769550 Other lineage4.9;La1.3 None
ERR4769527 Sensitive lineage4.9 None
ERR4769547 Sensitive lineage4.9;La1.3 None
ERR4769551 Other La1.3 None
ERR4796472 Pre-XDR-TB lineage2.2.1 None
ERR4769555 Other La1.3 None
ERR4769552 Other La1.3 None
ERR4798431 HR-TB None
ERR4797313 HR-TB None
ERR4797350 Sensitive lineage4.9 None
ERR4831848 HR-TB lineage4.2.2 vn
ERR4811031 Sensitive lineage4.5 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4799989 Pre-XDR-TB lineage2.2.1.2 None
ERR4810624 HR-TB lineage2.2 None
ERR4812155 Sensitive None
ERR4811030 Sensitive None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6866125 Sensitive lineage4.1.2.1 None
ERR6358951 HR-TB lineage4 None
ERR6359066 HR-TB lineage4 None
ERR6359074 HR-TB lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR6865513 Other lineage4.1.2.1 None
ERR736837 Other lineage4.9 None
ERR6866410 Sensitive None
ERR702406 HR-TB None
ERR736856 HR-TB lineage4 None
ERR176549 Other lineage4.3.4.2.1 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9786569 Other lineage4.8 None
ERR9119733 MDR-TB lineage2.2.1 None
ERR9786440 Other lineage4.1 None
ERR9786528 Sensitive lineage4.6.2.2 None
ERR9786604 Other None
ERR9786627 Other lineage4.1.2.1 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786671 Other None
ERR9787336 Other lineage6 None
ERR9786705 Sensitive lineage4.1.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787197 Other None
SRR10315567 Other lineage2.2.1 None
SRR1049560 MDR-TB lineage4.3.4.2.1 None
SRR10315751 MDR-TB lineage4.8 None
SRR1049673 Pre-XDR-TB lineage3 None
SRR1049672 Other lineage3 None
SRR1049559 MDR-TB lineage4.3.4.2.1 None
SRR1049581 MDR-TB lineage4.6.1.2 None
SRR1049582 MDR-TB lineage4.6.1.2 None
SRR1049726 MDR-TB lineage4.4.1.1;lineage4.1.2.1 None
SRR1049725 RR-TB lineage4.1.2.1 None
SRR10993951 RR-TB La1.6 None
SRR1062871 MDR-TB lineage4.3.4.2.1 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1062918 Pre-XDR-TB lineage3 None
SRR1062928 RR-TB lineage4 None
SRR1140716 Pre-XDR-TB lineage3 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1172807 Sensitive lineage4.9 None
SRR1172717 Other lineage4.9 None
SRR1140736 RR-TB None
SRR1140753 MDR-TB lineage4.3.4.2.1 None
SRR1173185 HR-TB lineage4.9 None
SRR1173170 Other lineage4.9 None
SRR1173521 HR-TB lineage4.9 None
SRR1173770 Other lineage4.9 None
SRR1175487 Sensitive lineage4.9 None
SRR1175491 MDR-TB lineage4 None
SRR1175472 MDR-TB lineage4 None
SRR1175507 MDR-TB lineage4 None
SRR1175496 HR-TB lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1175500 MDR-TB lineage4 None
SRR1180250 Other lineage4.9 None
SRR1175508 Other lineage4.9 None
SRR1180148 Sensitive lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1180375 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
SRR1180312 Sensitive lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9;lineage2.2 None
SRR1180391 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR1180440 Other lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR1180977 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR1181214 Other lineage4.9 None
SRR1181368 Other lineage4.9 None
SRR1181237 Sensitive lineage2.2 None
SRR1181283 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181325 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2 None
SRR1184021 Sensitive lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR16157123 Other lineage4.9 None
SRR13180203 Sensitive lineage4.2.2.1 None
SRR11972367 Sensitive lineage2.2.1 None
SRR13180363 Sensitive lineage4.1.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR20632814 Sensitive lineage4 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR19295647 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR4814396 Sensitive lineage4.1.1.3 None
ERR11081258 Other lineage4.8 None
SRR12708416 Sensitive lineage4.1 None
SRR3675477 Other lineage4.9 None
ERR176793 Other lineage4.1.1 None
SRR21576654 RR-TB lineage2.2.1 None
SRR21677886 Sensitive lineage4.9 None
SRR22175249 Pre-XDR-TB lineage2.2.1 None
ERR11081257 Other lineage4.8 None
SRR3675455 Sensitive lineage4 None
SRR3675473 Sensitive lineage4.9 None
SRR3675472 Sensitive lineage4.9 None
ERR779852 Sensitive lineage4.9;lineage4.8.1;lineage4.1.1 None
ERR4814623 Other lineage4.8 None
SRR3675209 Sensitive lineage4.9 None
ERR176518 Sensitive lineage4.3.4.2.1 None
SRR3675210 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR3275450 Other lineage4 None
SRR3675229 Other lineage4 None
ERR4814734 Other lineage1.2.1.1 None
ERR1750909 RR-TB lineage4.1.1.2 None
SRR3675249 Sensitive lineage4.9 None
SRR3675292 Sensitive lineage4 None
SRR3675279 Other None
SRR3675283 Sensitive lineage4.9 None
SRR3675266 Sensitive lineage4.9 None
SRR3675265 Other lineage4 None
SRR3675548 Sensitive lineage4.9 None
SRR3675318 Other lineage4.9 None
SRR3675522 Other None
SRR3675542 Other lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
ERR4816113 Sensitive lineage4.1.1 None
SRR3675387 Sensitive None
SRR3675514 Sensitive lineage4.9 None
SRR3675577 Sensitive lineage4.9 None
SRR3675553 Sensitive lineage4.9 None
SRR5341422 HR-TB lineage2.1 None
ERR4817060 RR-TB None
ERR4816198 Sensitive lineage4.1.3 None
ERR4816291 Sensitive lineage4.9 None
ERR4816470 Other lineage3 None
ERR216978 Sensitive lineage4.3.4.2.1 None
ERR212138 HR-TB lineage4 None
ERR4816548 MDR-TB lineage4.5 None
ERR216965 HR-TB lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4816729 Sensitive lineage4.9 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
ERR4816610 RR-TB lineage4.3.3 None
ERR228180 Sensitive lineage3 None
ERR2228900 RR-TB lineage4.8 None
SAMN02380982 MDR-TB lineage4.3.4.2 None
ERR4818988 Other lineage1 None
ERR4818710 Sensitive lineage4.9 None
ERR228175 Sensitive lineage3 None
ERR4818110 Sensitive lineage4.9 None
ERR4817998 Other lineage3 None
ERR2513121 Sensitive lineage3.1.3 None
ERR2513438 Sensitive lineage4.1.2.1 None
ERR2513259 Other lineage3 None
ERR4818126 RR-TB lineage1 None
ERR4818811 Pre-XDR-TB lineage2.2.1 None
ERR4818851 RR-TB lineage4.4.1.1 None
ERR4819051 Other lineage4 None
ERR4818904 Other lineage4.8 None
ERR2513283 Other lineage5.1.4 None
ERR2512770 Other lineage4.2.1 None
ERR3275709 HR-TB lineage3 nl
SAMEA3501067 RR-TB lineage4.8 None
SRR5007186 Other lineage4.6 None
ERR4819096 Other lineage4.4.1.1 None
SRR5341373 HR-TB lineage4 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR2100532 Sensitive lineage3 None
SRR5153091 HR-TB lineage4.3.3 None
ERR4819383 RR-TB lineage4.9 None
SRR5341396 Other lineage4 None
SRR5341400 HR-TB lineage4 None
ERR4819863 RR-TB lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR2514552 Sensitive lineage3 None
SRR5341296 Sensitive lineage4.9 None
ERR4820503 Other lineage2.2.1 None
SRR5341432 HR-TB lineage4 None
SRR5341293 HR-TB lineage4 None
ERR4819952 Sensitive La3 None
ERR4819864 RR-TB lineage1.1.3.1 None
ERR2446382 Other lineage4 None
SRR5341323 Sensitive lineage4 None
SRR2024953 MDR-TB lineage2.2.1 cn
ERR4820030 Other lineage4.9 None
ERR4820043 Sensitive lineage4.1.2.1 None
SRR5341345 Sensitive lineage4.9 None
ERR2515230 Sensitive lineage4.8 None
ERR4821796 Other lineage4.1.1 None
ERR2517475 Other lineage4 None
SRR6045503 HR-TB None
SRR6045480 Other lineage4.1.1 None
ERR4821143 RR-TB lineage4.9 None
ERR4821172 RR-TB lineage4.9 None
SRR6045706 Sensitive lineage4 None
ERR4821704 MDR-TB lineage4.3.3 None
SRR6046141 Other lineage4.9 None
ERR4821272 RR-TB lineage4.1.2.1 None
ERR4822261 RR-TB lineage2.2.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR2693227 Other lineage4.9 None
SRR6045664 Other lineage4.2.1 None
SRR6045892 Sensitive None
SRR6045832 HR-TB lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6044875 HR-TB lineage4.9 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR6045267 RR-TB lineage4 None
SRR6045010 Other lineage4 None
SRR6045033 HR-TB None
SRR6045071 Other lineage4.3.1.1 None
SRR6045371 Sensitive lineage4.2.1 None
ERR502478 RR-TB lineage4.9 None
SRR6046385 Other lineage4.9 None
SRR6046482 HR-TB None
SRR6046611 HR-TB lineage4.9 None
SRR6046659 Pre-XDR-TB lineage2.2.1 None
SRR6046897 Sensitive lineage4 None
ERR2851356 Sensitive lineage4.9 None
SRR6046802 Other lineage4 None
ERR502473 Pre-XDR-TB lineage4.9 None
ERR502474 Pre-XDR-TB lineage4.9 None
SRR6789624 MDR-TB lineage4.1 None
ERR502481 Pre-XDR-TB lineage4.9 None
ERR4831638 Sensitive None
ERR4831839 MDR-TB lineage2.2.1 None
SRR6785315 Sensitive lineage4.3.3 None
ERR502479 RR-TB lineage4.9 None
SRR8217918 HR-TB None
SRR6855695 Sensitive lineage4.8 None
ERR502517 MDR-TB lineage5.1.1 None
ERR502532 HR-TB None
ERR502943 HR-TB None
SRR9971270 RR-TB lineage2.2.1 None
SRR9971112 Other lineage2.2.1 None
SRR9613540 Sensitive lineage4.6.2.2 None
SRR9971080 RR-TB lineage2.2.1 None
SRR9970980 Other lineage4.1.2 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR9971114 Other lineage2.2.1 None
SRR9971113 Other lineage2.2.1 None
SRR9971150 RR-TB lineage4.8.1 None
ERR11465279 Sensitive lineage4.3.4.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR017781 Other lineage3 None
ERR11465232 Sensitive lineage4.1.2.1 None
ERR019855 Other lineage3 None
ERR028362 Sensitive None
ERR037234 Sensitive lineage4.9 None