lineage | Count |
---|---|
38 | |
lineage4 | 21 |
lineage4.9 | 23 |
lineage4.2.1 | 1 |
lineage5.1.4 | 1 |
lineage4.1.2.1 | 1 |
lineage2.2 | 1 |
lineage4.5 | 1 |
lineage4.3.4 | 1 |
La3 | 1 |
lineage7;lineage2.2.1.2 | 1 |
La1.7.1 | 1 |
lineage2.2.1 | 2 |
lineage4.1 | 1 |
lineage4.3 | 1 |
spoligotype | Count |
---|---|
None | 95 |
ID | Drug resistance | Lineage | Country iso2 | ERR176751 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR4816656 | HR-TB | None | SRR3675522 | Other | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR212033 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5341396 | Other | lineage4 | None | ERR4818929 | HR-TB | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6045519 | HR-TB | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR294266 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | ERR4831638 | Sensitive | None | ERR502943 | HR-TB | None | ERR1063858 | HR-TB | None | ERR323045 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR369157 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363447 | Sensitive | lineage4 | None | ERR3283031 | HR-TB | None | ERR3445503 | HR-TB | None | ERR363500 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797064 | Sensitive | None | ERR4769474 | HR-TB | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4769521 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4798431 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR736875 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR9119669 | HR-TB | None | SRR1169249 | Other | La3 | None | SRR1167384 | Other | lineage4 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR1169306 | Other | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | ERR176778 | HR-TB | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675279 | Other | None | SRR3675387 | Sensitive | None | ERR181887 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None |
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