lineage | Count |
---|---|
lineage4.9 | 39 |
La1.7.1;lineage4.9 | 1 |
lineage4 | 1 |
M.canetti;lineage4.9 | 4 |
La1.7.1;La1.7.X-unk4;lineage7 | 1 |
1 | |
lineage1.1.1;lineage4 | 1 |
lineage4.2;lineage4.9 | 2 |
La3;lineage4.9 | 5 |
lineage2.2 | 1 |
La1.7.1 | 1 |
La1.7;lineage4.9 | 1 |
La1.7.1;La1.7.X-unk4 | 1 |
lineage4.2;lineage4.8.1;lineage4.9 | 2 |
lineage2.2.1 | 2 |
lineage4.2.1 | 1 |
lineage2.2.1.2;lineage7 | 1 |
lineage4.5 | 1 |
lineage4.3.4 | 1 |
La3;lineage2.1;lineage4.9 | 1 |
lineage4.1.2.1 | 1 |
lineage5.1.4 | 1 |
lineage4.9;lineage7 | 1 |
lineage1;lineage4.9 | 1 |
lineage2.2.1;lineage4 | 1 |
spoligotype | Count |
---|---|
None | 73 |
ID | Drug resistance | Lineage | Country iso2 | ERR1063846 | HR-TB | lineage4.9 | None | SRR6044942 | HR-TB | lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR3675387 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR12708416 | Sensitive | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR3675312 | Sensitive | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR11252612 | Other | La3;lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | ERR4819241 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675441 | Other | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | SRR6045233 | Other | M.canetti;lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4819422 | HR-TB | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None |
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