lineage | Count |
---|---|
25 | |
lineage4.9 | 18 |
lineage4.1.1.3 | 3 |
lineage4 | 39 |
lineage4.3.3 | 2 |
La2 | 1 |
lineage1.2.2.2 | 1 |
lineage3.1.2 | 1 |
lineage4.5 | 2 |
lineage3.1.2.2;lineage3.1.2.1 | 1 |
lineage2.2.1 | 3 |
lineage3 | 1 |
lineage2.2.1.1 | 1 |
lineage4.1 | 1 |
lineage4.9;lineage4.6.3 | 1 |
spoligotype | Count |
---|---|
None | 100 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675522 | Other | None | ERR212034 | HR-TB | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR2101483 | Sensitive | lineage4.1.1.3 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | None | SRR5341384 | Sensitive | lineage4.9 | None | SRR5341453 | Sensitive | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341470 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4 | None | ERR4831638 | Sensitive | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6257066 | MDR-TB | lineage4.3.3 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6511621 | HR-TB | None | ERR349300 | Sensitive | lineage4.9 | None | SRR6896302 | Sensitive | lineage4.1.1.3 | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR323066 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | SRR6982450 | Sensitive | lineage4.1.1.3 | None | ERR1063896 | Sensitive | None | ERR3283025 | HR-TB | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4798431 | HR-TB | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR736872 | Sensitive | lineage4 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR6866410 | Sensitive | None | ERR736865 | HR-TB | None | SRR1172310 | HR-TB | None | ERR9119669 | HR-TB | None | SRR1002693 | MDR-TB | lineage4.3.3 | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1172214 | HR-TB | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR17832802 | HR-TB | lineage3 | None | SRR18912999 | Sensitive | lineage4.5 | None | SRR1174897 | HR-TB | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR181744 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | ERR176740 | HR-TB | None |
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