| lineage | Count |
|---|---|
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.9 | 17 |
| La2;lineage4.9 | 1 |
| lineage4.9;lineage9 | 3 |
| lineage3.1.2.2 | 1 |
| La2;lineage4.9;lineage9 | 1 |
| lineage3 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage2.2.1 | 3 |
| lineage4.2;lineage4.9 | 3 |
| lineage4.5 | 3 |
| lineage4.1.1.3 | 3 |
| lineage3.1.2.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage1.1.1;lineage4 | 1 |
| La1.7;lineage4.9 | 2 |
| 1 | |
| lineage4.9;lineage6.3 | 1 |
| lineage1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage1.2.2.2 | 1 |
| lineage2.2.1.1 | 1 |
| spoligotype | Count |
|---|---|
| None | 51 |
| ID | Drug resistance | Lineage | Country iso2 | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR17832802 | HR-TB | lineage3 | None | SRR5341453 | Other | lineage4.9 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR3675522 | Other | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR6982450 | Sensitive | lineage4.1.1.3 | None | SRR3675279 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR13292428 | Sensitive | lineage4.5 | None | ERR987729 | HR-TB | lineage3.1.2.1 | None | ERR4812155 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR29097026 | Other | lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR987722 | MDR-TB | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR2101483 | Sensitive | lineage4.1.1.3 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR4797285 | MDR-TB | lineage1.2.2.2 | None | SRR6896302 | Sensitive | lineage4.1.1.3 | None | SRR29050770 | Sensitive | lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR29096150 | Other | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR18912999 | Sensitive | lineage4.5 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None |
|---|