Rv0006 - c.552C>T


Drug resistance types
100 Sensitive 0 RR-TB 20 HR-TB 18 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 85 Other
lineage Counts
lineage Count
lineage1.1.1 109
lineage4.9 67
La3;lineage4.9 4
lineage4.3.1;lineage4.9;lineage6 1
lineage2.2.1 5
La1.7 2
lineage4.4.1.2 1
La1.7;M.canetti;lineage4.9 2
lineage4.3.4.2 6
La1.7;lineage4.9;lineage6 1
lineage4.5 2
La1.7;lineage4.9 6
lineage4.1.1.3;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage4 4
lineage4.3.4.1 1
lineage4.3.3 1
lineage4.1.2.1 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.7;lineage4.3.4.1 1
lineage4.1;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 1
La3;lineage4 1
lineage3 1
La3;M.canetti;lineage4.9 1
lineage4.1.1.3 1
lineage4.8 1
lineage4.3.2.1 1
La1.8.1 1
spoligotype Counts
spoligotype Count
None 226
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9786016 Sensitive lineage1.1.1 None
SRR10808399 Sensitive lineage4.9 None
SRR21691096 Sensitive lineage1.1.1 None
ERR3283014 Other La3;lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR4797313 Sensitive lineage2.2.1 None
ERR3797046 HR-TB lineage4.9 None
SRR3675222 Other La1.7 None
ERR3806597 Other lineage1.1.1 None
SRR1180413 Sensitive lineage4.9 None
ERR9786020 Sensitive lineage1.1.1 None
ERR4769450 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR4815325 Other lineage1.1.1 None
ERR10465992 HR-TB lineage1.1.1 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR1367686 Other lineage4.3.4.2 None
ERR349266 Other lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR18289193 Other lineage1.1.1 None
SAMEA2534913 Sensitive lineage1.1.1 None
ERR9117823 Sensitive lineage1.1.1 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR752229 Other lineage4.5 None
ERR369162 Other lineage4.9 None
ERR3803976 Sensitive lineage1.1.1 None
SRR3675385 Other La1.7;lineage4.9 None
ERR3324333 Sensitive lineage1.1.1 None
ERR4829126 MDR-TB lineage1.1.1 ng
SRR6046046 Other lineage4.9 None
SRR12882493 Sensitive lineage1.1.1 None
ERR363499 Other lineage4.9 None
ERR4816907 Other lineage1.1.1 None
ERR10679991 MDR-TB lineage1.1.1 None
ERR9786022 Sensitive lineage1.1.1 None
SRR3675501 Other La1.7;lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR552800_ERR552799 Sensitive lineage1.1.1 None
ERR1334050 Sensitive lineage1.1.1 gh
ERR3803988 Sensitive lineage1.1.1 None
ERR552094 Sensitive lineage1.1.1 None
ERR3275772 Sensitive lineage1.1.1 nl
ERR3803780 Sensitive lineage1.1.1 None
ERR4811385 Sensitive lineage1.1.1 None
SRR6046593 Other lineage4.9 None
SRR7069808 Sensitive lineage1.1.1 None
ERR3801359 Sensitive lineage1.1.1 None
SRR7070405 Sensitive lineage1.1.1 None
ERR349330 Sensitive lineage4.9 None
ERR9786014 Sensitive lineage1.1.1 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR11068460 Sensitive lineage1.1.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR3806609 Sensitive lineage1.1.1 None
ERR234194 Sensitive lineage1.1.1 None
ERR3283011 Other La3;lineage4.9 None
ERR3324361 Sensitive lineage1.1.1 None
ERR349299 Other lineage4.9 None
ERR349264 Other lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR363498 Other lineage4.9 None
ERR2679279 MDR-TB lineage1.1.1 None
SRR6046210 Other lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR3803816 Sensitive lineage1.1.1 None
SRR3675488 Other La1.7;lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR11043725 Sensitive lineage1.1.1 None
ERR10680047 MDR-TB lineage1.1.1 None
ERR9786006 Sensitive lineage1.1.1 None
ERR9786030 Sensitive lineage1.1.1 None
ERR047880 MDR-TB lineage1.1.1 ru
ERR9121267 Other lineage4.3.4.2 None
ERR9121248 Other lineage4.3.4.2 None
SRR3675387 Other lineage4.9 None
SRR19115675 Sensitive lineage1.1.1 None
ERR3797064 Other La3;lineage4.9 None
ERR4830353 HR-TB La1.7 None
ERR10680221 MDR-TB lineage1.1.1 None
ERR439975 Sensitive lineage1.1.1 None
ERR9786007 Sensitive lineage1.1.1 None
ERR7902697 MDR-TB lineage1.1.1 None
ERR363447 Other lineage4.9 None
ERR10465854 Sensitive lineage1.1.1 None
ERR373947 Other lineage4.9 None
ERR11050953 Sensitive lineage1.1.1 None
ERR7902747 HR-TB lineage1.1.1 None
ERR363500 Other lineage4.9 None
ERR047884 MDR-TB lineage1.1.1 gb
SAMN02231137 Sensitive lineage1.1.1 None
SRR3675260 Sensitive lineage4.9 None
ERR363479 Other lineage4.9 None
ERR552800 Sensitive lineage1.1.1 None
ERR11068451 Sensitive lineage1.1.1 None
ERR369159 Other lineage4.9 None
ERR363446 Other lineage4.9 None
SRR18289194 Sensitive lineage1.1.1 None
SRR18289203 Sensitive lineage1.1.1 None
SRR6045746 Sensitive lineage1.1.1 gb
SRR6045795 Other lineage2.2.1 None
ERR2679252 MDR-TB lineage1.1.1 None
ERR7902593 Sensitive lineage1.1.1 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR552799 Sensitive lineage1.1.1 None
ERR2027214 MDR-TB lineage1.1.1 None
SRR12882494 Sensitive lineage1.1.1 None
ERR373945 Other lineage4.9 None
ERR10680184 MDR-TB lineage1.1.1 None
ERR4195427 Sensitive lineage4.3.4.2 None
ERR4811453 Other lineage1.1.1 None
ERR369158 Other lineage4.9 None
ERR9786024 Sensitive lineage1.1.1 None
SAMEA2534408 Sensitive lineage1.1.1 None
SRR6046878 Other lineage4.9 None
ERR9786017 Sensitive lineage1.1.1 None
SRR998720 Sensitive lineage1.1.1 None
ERR3283055 HR-TB lineage4.9 None
ERR9786023 Other lineage1.1.1 None
SRR3675492 Other La1.7;lineage4.9 None
ERR10680016 MDR-TB lineage1.1.1 None
SRR6046245 Other lineage4.9 None
ERR369163 Other lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR10680024 MDR-TB lineage1.1.1 None
ERR7902666 Sensitive lineage1.1.1 None
SRR12882040 Sensitive lineage1.1.1 None
ERR349265 Other lineage4.9 None
SRR22251355 Sensitive lineage1.1.1 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR26399490 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR4829278 Sensitive lineage1.1.1 None
ERR4811031 Other lineage4.5 None
ERR11465801 Other lineage4.3.4.1 None
ERR4811030 Other lineage4.9 None
ERR400326 Other lineage4.9 None
ERR10680212 MDR-TB lineage1.1.1 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR4821402 Sensitive lineage4.3.3 gb
ERR2446566 Other lineage4.9 None
ERR552093 Sensitive lineage1.1.1 None
ERR9786012 Sensitive lineage1.1.1 None
SRR998721 Sensitive lineage1.1.1 None
ERR4195261 Other lineage4.3.4.2 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR2514061 Sensitive lineage1.1.1 gb
ERR117618 Pre-XDR-TB lineage1.1.1 None
ERR553258 Sensitive lineage1.1.1 None
ERR4812155 Other lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR9786015 Sensitive lineage1.1.1 None
ERR363445 Other lineage4.9 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR363453 Other lineage4.9 None
ERR473332 Other lineage4.9 None
ERR028332 Sensitive lineage1.1.1 None
ERR550994 Sensitive lineage1.1.1 None
ERR9786013 Sensitive lineage1.1.1 None
ERR9786018 Sensitive lineage1.1.1 None
ERR3804112 Sensitive lineage1.1.1 None
ERR4821368 Other lineage1.1.1 None
ERR4769452 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR10680103 MDR-TB lineage1.1.1 None
ERR10680173 MDR-TB lineage1.1.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR11342380 Sensitive lineage1.1.1 None
SRR998722 Sensitive lineage1.1.1 None
SRR16370298 Other lineage1.1.1 None
ERR6359082 Other lineage4.9 None
SRR12882492 HR-TB lineage1.1.1 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR1367683 HR-TB lineage4.3.4.2 None
ERR3283028 Other La3;lineage4 None
ERR363456 Sensitive lineage4.9 None
SRR6045053 Other lineage4 None
SRR28044873 Pre-XDR-TB lineage3 None
ERR349300 Other lineage4.9 None
ERR7902729 HR-TB lineage1.1.1 None
ERR9786021 Sensitive lineage1.1.1 None
ERR2679299 Sensitive lineage1.1.1 None
ERR363449 Other lineage4.9 None
ERR7902716 Sensitive lineage1.1.1 None
SRR22251640 Other lineage1.1.1 None
ERR10680205 MDR-TB lineage1.1.1 None
SRR10808668 Other lineage2.2.1 None
ERR363421 Other lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR998723 Sensitive lineage1.1.1 None
SRR12882496 HR-TB lineage1.1.1 None
ERR3801609 Sensitive lineage1.1.1 None
ERR6866410 HR-TB lineage4.9 None
ERR11466044 Other lineage4.1.1.3 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR9786010 Sensitive lineage1.1.1 None
ERR12268357 Sensitive lineage1.1.1 None
ERR4799025 Other lineage4.8 None
SRR12708407 HR-TB lineage4.3.2.1 None
ERR3804037 Sensitive lineage1.1.1 None
ERR373946 Other lineage4.9 None
ERR3799585 Sensitive lineage1.1.1 None
ERR6865502 Sensitive lineage4 None
SRR14801749 HR-TB lineage4.9 None
SRR7236414 Other La1.8.1 None
ERR552093_ERR552094 Sensitive lineage1.1.1 None
ERR3797063 Other La3;lineage4.9 None
ERR2679251 Sensitive lineage1.1.1 None
SRR7131254 Sensitive lineage1.1.1 None
ERR3803970 Sensitive lineage1.1.1 None
ERR9786019 Sensitive lineage1.1.1 None