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SRA data
Rv0006
- c.552C>T
Drug resistance types
137 Sensitive
0 RR-TB
16 HR-TB
18 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
66 Other
lineage Counts
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lineage
Count
lineage
Count
lineage1.1.1
115
lineage4.9
73
La1.7;lineage4.9
8
lineage4.3.4.2
6
lineage2.2.1
5
lineage4
4
La3;lineage4.9
4
La1.7;M.canetti;lineage4.9
2
lineage4.5
2
La1.7
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
240
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR028332
Sensitive
lineage1.1.1
None
ERR047880
MDR-TB
lineage1.1.1
ru
ERR047884
MDR-TB
lineage1.1.1
gb
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR1034652
Other
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2
None
ERR10465854
Sensitive
lineage1.1.1
None
ERR10465992
HR-TB
lineage1.1.1
None
ERR10679991
MDR-TB
lineage1.1.1
None
ERR10680016
MDR-TB
lineage1.1.1
None
ERR10680024
MDR-TB
lineage1.1.1
None
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