lineage | Count |
---|---|
lineage4 | 25 |
lineage4.1.2.1 | 16 |
19 | |
lineage4.9 | 29 |
lineage4.5 | 1 |
lineage2.2 | 1 |
lineage4.6.2.2 | 1 |
lineage6.1.3 | 1 |
La1.8.1 | 1 |
lineage2.2.1 | 1 |
lineage4.1 | 1 |
lineage3 | 3 |
lineage4.2.1 | 1 |
lineage5.1.4 | 1 |
lineage4.1.1.3 | 1 |
lineage4;lineage1.1.2 | 1 |
spoligotype | Count |
---|---|
None | 103 |
ID | Drug resistance | Lineage | Country iso2 | ERR323066 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1063896 | Sensitive | None | ERR400320 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4811030 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR736834 | Sensitive | lineage4 | None | ERR4812155 | Sensitive | None | ERR6336762 | Other | None | ERR5917710 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | SRR1162740 | Other | lineage4.1.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR13837540 | HR-TB | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR13861146 | Sensitive | lineage4.9 | None | SRR13837544 | Sensitive | lineage4.9 | None | SRR13861151 | RR-TB | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861571 | RR-TB | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR1791747 | Other | La1.8.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675486 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR3675229 | Other | lineage4 | None | ERR4812763 | Other | lineage2.2.1 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR13861251 | RR-TB | lineage4.9 | None | SRR13861376 | Other | lineage4.9 | None | SRR13861381 | MDR-TB | lineage4.9 | None | SRR13861399 | Other | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR6325445 | HR-TB | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675547 | Other | lineage4.9 | None | SRR3675522 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4 | None | ERR3275220 | Other | lineage3 | nl | ERR2512770 | Other | lineage4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341453 | Sensitive | None | SRR5341396 | Other | lineage4 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR3275215 | Other | lineage4.1.2.1 | nl | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | SRR5341437 | Sensitive | lineage4.9 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR2446382 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2446144 | Other | lineage3 | nl | ERR2517475 | Other | lineage4 | None | ERR278594 | HR-TB | None | ERR2446118 | Other | lineage4.1.2.1 | nl | SRR5341461 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6045217 | Other | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6325448 | HR-TB | None | ERR2517528 | Other | lineage3 | nl | ERR2517489 | Sensitive | lineage4.1.2.1 | nl | SRR6325447 | HR-TB | None | SRR6511621 | HR-TB | None |
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