Rv0668 - c.1161C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
45 Sensitive
4 RR-TB
20 HR-TB
4 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 46 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage2.1;lineage4.9 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 3 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage4.1.1;lineage4.9 | 1 |
| lineage2.2 | 1 |
| lineage4.1.2.1 | 10 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| 3 | |
| lineage5.1.4 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 3 |
| lineage4.5 | 1 |
| lineage4.3.3 | 2 |
| M.canetti;lineage2.1;lineage4.1.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage2.2.1 | 2 |
| lineage4.1.1.3 | 1 |
| lineage4 | 3 |
| La1.7;lineage4.9 | 1 |
| lineage4.3 | 1 |
| lineage6.1.3 | 1 |
| lineage1.1.2;lineage4 | 1 |
| lineage4.1.1.1 | 1 |
| lineage1;lineage4.9 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 98 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341300 | HR-TB | lineage4.9 | None | SRR3675279 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR400326 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR278594 | HR-TB | lineage2.1;lineage4.9 | None | ERR5311089 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR6325442 | HR-TB | lineage4.1.1;lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR176766 | HR-TB | lineage2.1;lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR12708416 | Sensitive | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR386953 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325448 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR4796254 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR1165506 | Other | lineage4.1.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR5917710 | Other | lineage4.1.2.1 | None | SRR3675318 | Other | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR1023295 | MDR-TB | M.canetti;lineage2.1;lineage4.1.2.1 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR13861399 | Other | lineage4.9 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR6045290 | RR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR3675547 | Sensitive | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1640750 | Other | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR2693228 | RR-TB | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR3675486 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | SRR5341366 | Sensitive | lineage4.9 | None | ERR4812763 | Other | lineage2.2.1 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR13861381 | HR-TB | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR5341303 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR5341453 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR4817692 | HR-TB | lineage1.1.2;lineage4 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR6325447 | HR-TB | lineage4.1.1.1 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR1165423 | RR-TB | lineage4.1.2.1 | None | ERR736834 | Sensitive | lineage4.9 | None | SRR5341298 | Sensitive | lineage4.9 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR2517475 | Other | lineage4 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR1162864 | Other | lineage4.1.2.1 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR13861151 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR6045952 | HR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR2693242 | RR-TB | lineage2.1;lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR3275450 | Other | lineage4 | None | SRR1163221 | MDR-TB | lineage4.1.2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR6325445 | HR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None |
|---|
