Rv0005 - c.1524G>C


Drug resistance types
34 Sensitive 2 RR-TB 44 HR-TB 8 MDR-TB 5 Pre-XDR-TB 1 XDR-TB 121 Other
lineage Counts
lineage Count
lineage4.9 70
lineage2.2.1 12
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1;lineage4.9 2
lineage4.3.1;lineage4.9;lineage6 1
lineage4.1.2.1 8
lineage2.1;lineage4.9 14
lineage2.1 5
lineage2.1;lineage4.9;lineage6.3 8
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.1;lineage4.9 1
lineage5.1.4 1
14
lineage3 2
La3;M.canetti;lineage2.2.1 1
lineage4.4.1.1.1 1
La3;lineage4.9 1
lineage4.3.3 2
La1;lineage2;lineage4.9 1
lineage4.9;lineage6.3 5
lineage2.2.1;lineage3 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.2.2.2 1
lineage3.1 1
lineage4.5 2
lineage4.1.1.1 1
lineage4.3.2 1
lineage1.1.2 1
La3 2
M.canetti;lineage2.1;lineage4.9 2
La1;lineage4.1.2 1
La3;lineage2.2.1 1
La1.7;lineage4.2 1
lineage4 5
lineage4.3.4.1 1
La3;lineage2.1;lineage6.3 1
lineage4.7 2
La3;lineage1.1.2 1
lineage4.1.2 1
lineage2.2 1
lineage4.8 1
La1.2.BCG;La1.8.1 1
lineage4.6.1.1 1
lineage2.2.1;lineage6.3 1
lineage4.9;lineage6.1.3 1
lineage1;lineage4.9 1
lineage4.1.3 2
lineage4.1 1
La3;lineage4.8 1
La3;lineage2 1
lineage4.8.1 1
La3;lineage2.1;lineage4.9 2
M.canetti;lineage2.1;lineage6.3 1
lineage1.1.1;lineage4 1
lineage4.6.2.2 1
M.canetti;lineage4.9;lineage9 1
lineage1.1.3.1 1
lineage4.1.1.3;lineage4.9 1
lineage2.1;lineage6.3 2
lineage4.2.1.1;lineage4.3.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage6.3.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4 1
lineage4.1.1.3 1
lineage1.2.1.1 1
lineage4.2.1 1
lineage2.2.1.2;lineage7 1
lineage4.4.1.1 1
spoligotype Counts
spoligotype Count
None 215
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR323107 HR-TB lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4814352 Other lineage2.2.1 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR133825 HR-TB La1;lineage4.9 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR4819781 Other lineage2.2.1 None
ERR9786694 Other lineage4.1.2.1 None
SRR3675514 Sensitive lineage4.9 None
SRR1172234 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR1196546 Other lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786601 Other lineage4.1.2.1 None
SRR3675311 Other lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR2513283 Sensitive lineage5.1.4 None
SRR7131023 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341456 Other lineage4.9 None
ERR9786671 Other None
SRR1173363 Other None
SRR1184372 MDR-TB None
SRR18213713 HR-TB None
ERR4816999 Other None
SRR28119777 Other lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR5153091 HR-TB lineage4.3.3 None
SRR3675312 Sensitive lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341345 Sensitive lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
ERR4818536 Other lineage4.9 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR2513470 Other lineage4.2.2.2 None
SRR1184346 HR-TB lineage3.1 None
SRR1173400 Other lineage4.9 None
ERR4811031 Other lineage4.5 None
ERR4811030 Other lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
ERR400326 Other lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR9117805 Other lineage4.3.2 None
SRR1172951 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4596910 Sensitive lineage4.9 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
SRR3675457 Other lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR3797046 HR-TB lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR4797588 MDR-TB lineage3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR23961559 Other La1.7;lineage4.2 None
ERR2517475 Other lineage4 None
ERR4819241 Other lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR9786682 Other lineage4.1.2.1 None
ERR11465279 Sensitive lineage4.3.4.1 None
ERR9786642 Other lineage4.1.2.1 None
SRR3675572 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR9786604 Other None
ERR234659 HR-TB None
SRR25827682 Other None
SRR3675236 Other None
SRR12708416 Sensitive None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR9971114 Other lineage2.2.1 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3675549 Other lineage4.9 None
SRR1710057 Other lineage2.1 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR3283055 HR-TB lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1196677 Other lineage2.2 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142339 HR-TB lineage2.2.1 None
SRR6046564 Sensitive lineage4.9 None
SRR1184312 Other lineage2.2.1 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR6358755 Other lineage4.6.1.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR400345 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1173118 Other lineage2.2.1 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR400336 Sensitive lineage4.9 None
SRR7496472 Other lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
ERR4816478 HR-TB lineage4 None
SRR3675541 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786440 Other lineage4.1 None
ERR12015083 Other La3;lineage4.8 None
SRR3675547 Sensitive lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR12708389 MDR-TB lineage4.8.1 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6044835 Other lineage4.9 None
ERR4815752 Other lineage4.9 None
SRR1172817 Other La3 None
SRR6045191 Sensitive lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045892 Sensitive lineage4.9 None
ERR2446382 Other lineage4 None
SRR12708419 Other lineage4.3.3 None
ERR4819422 HR-TB lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR9786645 Other lineage4.6.2.2 None
SRR7496523 Other lineage4.7 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
SRR6789626 Other None
ERR9787197 Other None
SRR28119805 Other lineage4.9 None
ERR752229 Other lineage4.5 None
SRR1196583 Other lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR3275450 Other lineage4 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR4818929 HR-TB lineage4.9 None
ERR11465025 Other lineage4.1.1.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR702406 Other lineage2.1 None
SRR1173633 Other lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR6046245 Other lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
SRR3675210 Sensitive lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12708398 Sensitive lineage4.4.1.1 None