SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
ERR4797054
|
Pre-XDR-TB
|
lineage2.1
|
None
|
SRR5341302
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR502532
|
Other
|
M.canetti;lineage2.1;lineage6.3
|
None
|
SRR6044835
|
Other
|
lineage4.9
|
None
|
ERR9786645
|
Other
|
lineage4.6.2.2
|
None
|
SRR6045892
|
Sensitive
|
lineage4.9
|
None
|
SRR1184294
|
Other
|
lineage4.9
|
None
|
SRR12708416
|
Sensitive
|
|
None
|
ERR4796929
|
Sensitive
|
lineage4.9
|
None
|
ERR4831638
|
Sensitive
|
lineage1.1.1;lineage4
|
None
|
SRR5341456
|
Other
|
lineage4.9
|
None
|
SRR12416824
|
HR-TB
|
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
SRR1184381
|
MDR-TB
|
|
None
|
ERR234659
|
Other
|
|
None
|
ERR4814352
|
Other
|
lineage2.2.1
|
None
|
ERR4797313
|
Sensitive
|
lineage2.2.1
|
None
|
SRR3675547
|
Sensitive
|
lineage4.9
|
None
|
SRR28119756
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR9786421
|
Other
|
lineage4.1.2.1
|
None
|
ERR4819422
|
HR-TB
|
lineage4.9
|
None
|
SRR7496523
|
Other
|
lineage4.7
|
None
|
SRR11349145
|
Pre-XDR-TB
|
lineage4.4.1.1.1
|
None
|
ERR4815752
|
Other
|
lineage4.9
|
None
|
SRR3675477
|
Sensitive
|
lineage4.9
|
None
|
SRR6045380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675465
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR6045242
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR3445504
|
Other
|
lineage4.9;lineage6.1.3
|
None
|
SRR1172951
|
Other
|
lineage4.9
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
ERR4810741
|
HR-TB
|
La3;lineage2.1;lineage6.3
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
SRR3742665
|
HR-TB
|
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3
|
None
|
ERR1063856
|
HR-TB
|
M.canetti;lineage4.9;lineage9
|
None
|
ERR736874
|
Other
|
La3;lineage2.1;lineage4.9
|
None
|
ERR502943
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR9786682
|
Other
|
lineage4.1.2.1
|
None
|
SRR5153091
|
HR-TB
|
lineage4.3.3
|
None
|
ERR4820773
|
HR-TB
|
lineage4.9
|
None
|
ERR4821686
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR13285068
|
Sensitive
|
lineage4.9
|
None
|
SRR6044790
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675455
|
Sensitive
|
lineage4.9
|
None
|
ERR323107
|
Sensitive
|
lineage4.9
|
None
|
ERR4811105
|
HR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
SRR25827497
|
XDR-TB
|
lineage2.2.1;lineage3
|
None
|
SRR3675216
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR12708374
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR12708398
|
Sensitive
|
lineage4.4.1.1
|
None
|
ERR2513470
|
Other
|
lineage4.2.2.2
|
None
|
SRR6789626
|
Other
|
|
None
|
ERR067699
|
Sensitive
|
La1;lineage2;lineage4.9
|
None
|
SRR1196546
|
Other
|
lineage4.9
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
SRR6046245
|
Other
|
lineage4.9
|
None
|
SRR1184380
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR6458423
|
HR-TB
|
lineage2.2.1
|
None
|
SRR3675524
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR11465025
|
Other
|
lineage4.1.1.3
|
None
|
ERR4596910
|
Sensitive
|
lineage4.9
|
None
|
ERR4816478
|
HR-TB
|
lineage4
|
None
|
ERR13265748
|
Other
|
lineage4.9;lineage6.3
|
None
|
SRR1172728
|
RR-TB
|
La3
|
None
|
SRR28119777
|
Other
|
lineage4.9
|
None
|
ERR736859
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
ERR133825
|
HR-TB
|
La1;lineage4.9
|
None
|
ERR8479578
|
Sensitive
|
lineage1.1.3.1
|
None
|
ERR4816656
|
Other
|
lineage4.9
|
None
|
SRR3675247
|
Other
|
lineage4.9
|
None
|
ERR9786611
|
HR-TB
|
lineage4.1.3
|
None
|
SRR1172817
|
Other
|
La3
|
None
|
ERR4797193
|
HR-TB
|
lineage1.1.2
|
None
|
SRR9970978
|
Sensitive
|
La1;lineage4.1.2
|
None
|
ERR736867
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR12708389
|
MDR-TB
|
lineage4.8.1
|
None
|
ERR323043
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4798493
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1184346
|
HR-TB
|
lineage3.1
|
None
|
SRR3675490
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR7496472
|
Other
|
lineage4.9
|
None
|
SRR10315551
|
Sensitive
|
lineage2.2.1
|
None
|
SRR2010299
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR7131023
|
Other
|
lineage4.1.2.1
|
None
|
ERR3797070
|
Other
|
lineage4.9
|
None
|
SRR12708419
|
Other
|
lineage4.3.3
|
None
|
ERR9786642
|
Other
|
lineage4.1.2.1
|
None
|
SRR1173118
|
Other
|
lineage2.2.1
|
None
|
SRR28119805
|
Other
|
lineage4.9
|
None
|
ERR9786601
|
Other
|
lineage4.1.2.1
|
None
|
ERR9786671
|
Other
|
|
None
|
SRR12142341
|
HR-TB
|
lineage2.1
|
None
|
ERR3283055
|
HR-TB
|
lineage4.9
|
None
|
ERR4819781
|
Other
|
lineage2.2.1
|
None
|
SRR1173633
|
Other
|
lineage4.9
|
None
|
SRR1184372
|
MDR-TB
|
|
None
|
ERR9786440
|
Other
|
lineage4.1
|
None
|
ERR9786604
|
Other
|
|
None
|
SRR1165667
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR2512770
|
Sensitive
|
lineage4.2.1
|
None
|
SRR1173778
|
Other
|
lineage4.9
|
None
|
ERR4818021
|
Other
|
La1.2.BCG;La1.8.1
|
None
|
ERR4818929
|
HR-TB
|
lineage4.9
|
None
|
SRR1196583
|
Other
|
lineage4.9
|
None
|
SRR9971114
|
Other
|
lineage2.2.1
|
None
|
SRR28119717
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR3283019
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3742657
|
Pre-XDR-TB
|
La3;M.canetti;lineage2.2.1
|
None
|
ERR736871
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4811075
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1184388
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4811022
|
HR-TB
|
M.canetti;lineage2.1;lineage4.9
|
None
|
SRR19303884
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR6045191
|
Sensitive
|
lineage4.9
|
None
|
ERR4811142
|
RR-TB
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6046299
|
Other
|
lineage4.3.1;lineage4.9;lineage6
|
None
|
ERR736837
|
Pre-XDR-TB
|
lineage4.9
|
None
|
SRR3675467
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR1184312
|
Other
|
lineage2.2.1
|
None
|
ERR4814734
|
Other
|
lineage1.2.1.1
|
None
|
SRR10809074
|
Sensitive
|
lineage4.9
|
None
|
ERR2027263
|
Other
|
lineage4
|
None
|
SRR5341330
|
Other
|
lineage4.9
|
None
|
ERR1873492
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
ERR400326
|
Other
|
lineage4.9
|
None
|
SRR5341323
|
Sensitive
|
lineage4.9
|
None
|
ERR11465279
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR2446382
|
Other
|
lineage4
|
None
|
ERR9117805
|
Other
|
lineage4.3.2
|
None
|
SRR6046564
|
Sensitive
|
lineage4.9
|
None
|
SRR1165699
|
Other
|
lineage4.9
|
None
|
ERR3804169
|
HR-TB
|
lineage4.1.3
|
None
|
SRR3675541
|
Sensitive
|
lineage4.9
|
None
|
SRR3675387
|
Other
|
lineage4.9
|
None
|
ERR4812155
|
Other
|
lineage4.9
|
None
|
SRR3675229
|
Sensitive
|
lineage4.9
|
None
|
SRR3675549
|
Other
|
lineage4.9
|
None
|
SRR1172234
|
Other
|
lineage4.9
|
None
|
SRR28119752
|
Other
|
lineage4.9
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR29016780
|
Other
|
lineage4.9
|
None
|
SRR23961559
|
Other
|
La1.7;lineage4.2
|
None
|
SRR3675311
|
Other
|
lineage4.9
|
None
|
SRR3675312
|
Sensitive
|
lineage4.9
|
None
|
ERR3804155
|
Other
|
lineage4.1.2.1
|
None
|
ERR2513283
|
Sensitive
|
lineage5.1.4
|
None
|
SRR3675221
|
Other
|
lineage4.9
|
None
|
SRR25827682
|
Other
|
|
None
|
ERR9787197
|
Other
|
|
None
|
SRR6789621
|
Other
|
lineage4.9
|
None
|
SRR8552928
|
HR-TB
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4818536
|
Other
|
lineage4.9
|
None
|
ERR2517475
|
Other
|
lineage4
|
None
|
SRR1175500
|
Sensitive
|
lineage4.1.1.3;lineage4.9
|
None
|
SRR1173363
|
Other
|
|
None
|
SRR3675572
|
Other
|
|
None
|
SRR3675457
|
Other
|
lineage4.9
|
None
|
SRR5341333
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR13265528
|
Other
|
lineage4.9;lineage6.3
|
None
|
ERR4797350
|
Sensitive
|
lineage1;lineage4.9
|
None
|
ERR3283036
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR9786694
|
Other
|
lineage4.1.2.1
|
None
|
ERR4819241
|
Other
|
lineage4.9
|
None
|
ERR3283027
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR19304036
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR9786569
|
Other
|
lineage4.8
|
None
|
SRR18549032
|
HR-TB
|
lineage2.2.1.2;lineage7
|
None
|
ERR752229
|
Other
|
lineage4.5
|
None
|
SRR6046540
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR3675275
|
Other
|
lineage4.9
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
SRR18213713
|
HR-TB
|
|
None
|
SRR12142339
|
HR-TB
|
lineage2.2.1
|
None
|
SRR20969677
|
HR-TB
|
La3;lineage2
|
None
|
ERR9787139
|
Other
|
lineage6.3.1
|
None
|
SRR1710057
|
Other
|
lineage2.1
|
None
|
ERR3275450
|
Other
|
lineage4
|
None
|
ERR4831546
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
SRR3675580
|
Sensitive
|
lineage4.9
|
None
|
ERR400320
|
Sensitive
|
lineage4.9
|
None
|
SRR1173629
|
Other
|
lineage2.1;lineage4.9
|
None
|
ERR4817896
|
HR-TB
|
lineage2.2.1
|
None
|
ERR3797069
|
Other
|
lineage4.9
|
None
|
SRR26399973
|
Other
|
La3;lineage4.9
|
None
|
ERR4819932
|
Other
|
lineage4.7
|
None
|
SRR3675522
|
Other
|
lineage4.9
|
None
|
SRR3416776
|
Other
|
lineage2.1
|
None
|
ERR9117721
|
HR-TB
|
La3;lineage1.1.2
|
None
|
SRR9970980
|
HR-TB
|
lineage4.1.2
|
None
|
SRR3675210
|
Sensitive
|
lineage4.9
|
None
|
SRR1196677
|
Other
|
lineage2.2
|
None
|
SRR3675529
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
ERR4816585
|
Other
|
lineage2.2
|
None
|
SRR3675279
|
Sensitive
|
lineage4.9
|
None
|
SRR3675473
|
Sensitive
|
lineage4.9
|
None
|
SRR3675514
|
Sensitive
|
lineage4.9
|
None
|
ERR400345
|
Other
|
lineage4.9
|
None
|
SRR28119811
|
Other
|
lineage2.2.1;lineage6.3
|
None
|
ERR4816999
|
Other
|
|
None
|
ERR4797588
|
MDR-TB
|
lineage3
|
None
|
SRR28119753
|
Other
|
lineage4.9
|
None
|
SRR10808805
|
Other
|
La1;lineage4.9
|
None
|
SRR29093909
|
Other
|
lineage4.9
|
None
|
ERR4815441
|
HR-TB
|
lineage4.9
|
None
|
SRR20970043
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR400336
|
Sensitive
|
lineage4.9
|
None
|
SRR3675236
|
Other
|
|
None
|
ERR176793
|
Other
|
lineage4.1.1.1
|
None
|
SRR29017461
|
Other
|
La3;lineage4.9
|
None
|
ERR4811311
|
Other
|
lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR12708372
|
Sensitive
|
lineage4.9
|
None
|
ERR4819877
|
HR-TB
|
lineage4.9
|
None
|
ERR4800341
|
Other
|
lineage3
|
None
|
ERR4817731
|
HR-TB
|
lineage4.9
|
None
|
ERR702406
|
Other
|
lineage2.1
|
None
|
SRR5341437
|
Sensitive
|
lineage4.9
|
None
|
ERR5336148
|
Other
|
lineage2.1;lineage6.3
|
None
|
SRR3675581
|
Other
|
lineage2.1;lineage4.9
|
None
|
SRR1173400
|
Other
|
lineage4.9
|
None
|
ERR12015083
|
Other
|
La3;lineage4.8
|
None
|
SRR26937071
|
MDR-TB
|
La3;lineage2.2.1
|
None
|
ERR3797046
|
HR-TB
|
lineage4.9
|
None
|
ERR1334034
|
Other
|
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3
|
None
|