EBG00000313339 - n.982G>T
Drug resistance types
52 Sensitive
18 RR-TB
48 HR-TB
9 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
80 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 116 |
| La1.8.1 | 3 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.8 | 30 |
| La1;lineage4.1.2 | 1 |
| lineage4.3.4.2 | 2 |
| lineage6.1.2 | 1 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.1.1.3 | 2 |
| lineage4.1.2.1 | 2 |
| lineage2.2.1 | 8 |
| La1.7;lineage4.9 | 6 |
| lineage3 | 1 |
| lineage1.1.2 | 3 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage3.1.2.1 | 1 |
| La1.7;lineage4.9;lineage7 | 2 |
| lineage5.2 | 2 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1;lineage4.9 | 2 |
| lineage4 | 1 |
| lineage6 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage3;lineage4.9 | 1 |
| 2 | |
| lineage2.2 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| lineage4.5 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.9.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage1.1.3.1 | 1 |
| lineage4.6.2.2 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.1.2 | 1 |
| La2;lineage4.9 | 1 |
| lineage6.1.3 | 1 |
| lineage4.4.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 211 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR10809074 | HR-TB | lineage4.9 | None | ERR363490 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR3468488 | Other | La1.8.1 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR363453 | Other | lineage4.9 | None | ERR978752 | Other | lineage4.8 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR373947 | Other | lineage4.9 | None | SRR5341425 | Other | lineage4.9 | None | ERR9787030 | RR-TB | lineage6.1.2 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR363479 | Other | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SAMEA3501052 | RR-TB | lineage4.8 | None | ERR363446 | Other | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR28044873 | Pre-XDR-TB | lineage3 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR369162 | Other | lineage4.9 | None | SRR1173568 | Sensitive | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR978746_ERR978747_ERR978748 | RR-TB | lineage4.8 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR5341298 | Other | lineage4.9 | None | ERR363499 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR978747 | Other | lineage4.8 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR978757 | RR-TB | lineage4.8 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR978761_ERR978762_ERR978760 | RR-TB | lineage4.8 | None | ERR978735 | Other | lineage4.8 | None | ERR9119483 | Pre-XDR-TB | lineage5.2 | None | ERR373946 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR5341387 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR978751 | Other | lineage4.8 | None | SAMEA3501063 | RR-TB | lineage4.8 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR9787362 | Sensitive | lineage6 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR1158918 | Other | lineage4.9 | None | ERR978734 | RR-TB | lineage4.8 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | SRR1173777 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR363500 | Other | lineage4.9 | None | ERR978726_ERR978727 | RR-TB | lineage4.8 | None | SRR3675260 | Sensitive | lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | ERR369159 | Other | lineage4.9 | None | SAMEA3501046 | RR-TB | lineage4.8 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR1063896 | HR-TB | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR349300 | Other | lineage4.9 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR363449 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR373945 | Other | lineage4.9 | None | ERR911929_ERR911930 | Other | lineage4.8 | None | ERR978756 | Other | lineage4.8 | None | SRR10808668 | Other | lineage2.2.1 | None | ERR363421 | Other | lineage4.9 | None | ERR702405 | HR-TB | lineage4.9 | None | ERR978694_ERR978693 | Other | lineage4.8 | None | SRR3675292 | Sensitive | lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | SRR7535082 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR369163 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR067699 | HR-TB | La1;lineage2;lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR978748 | Other | lineage4.8 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | SRR6982141 | Other | lineage4.3.3 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR1035122 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR405209 | Sensitive | La1.7;lineage4.9 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | ERR323107 | HR-TB | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR363502 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341293 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR5341455 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR978734_ERR978733_ERR978735 | RR-TB | lineage4.8 | None | ERR4872077 | Pre-XDR-TB | lineage5.2 | None | ERR037504 | Other | lineage4.9.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SAMEA3501070 | RR-TB | lineage4.8 | None | ERR1034634 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR978761 | Other | lineage4.8 | None | SRR6045503 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR736856 | HR-TB | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR12708416 | Sensitive | None | ERR9786597 | Other | lineage4.6.2.2 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR978755 | RR-TB | lineage4.8 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR978694 | Other | lineage4.8 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR9786592 | Other | lineage4.3.4.2 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR1791747 | Other | La1.8.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SAMEA3501015 | Other | lineage4.8 | None | SRR5341400 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR978762 | Other | lineage4.8 | None | ERR978750_ERR978752_ERR978751 | RR-TB | lineage4.8 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR978755_ERR978756_ERR978754_ERR978757 | RR-TB | lineage4.8 | None | SRR16156817 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR6981999 | Sensitive | lineage2.2.1 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR7236177 | Other | La1.8.1 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR978727 | Other | lineage4.8 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR911930 | Other | lineage4.8 | None | ERR349299 | Other | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | SAMEA3450033 | Other | lineage4.8 | None | SRR3675318 | Other | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR5341453 | Other | lineage4.9 | None |
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