Rv0005 - c.1569C>G


Drug resistance types
51 Sensitive 1 RR-TB 32 HR-TB 5 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 70 Other
lineage Counts
lineage Count
lineage4.9 102
lineage2.2.1 3
lineage4 6
lineage4.1;lineage4.9 2
lineage4.3.4.2.1 4
lineage1.1.1;lineage4 1
lineage4.1.2.1 4
La1.6;La3;lineage4.9 2
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
M.canetti;lineage4.9 3
lineage3;lineage4.9 1
lineage4.1.1.3;lineage4.9 2
lineage4.3.4.1 1
2
lineage4.1.1.1 6
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1;lineage4.9 1
lineage4.3.3 1
La1;lineage4.1.2 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.4.1.2 1
lineage5.1.4 1
La1.7;M.canetti;lineage4.9 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.7;lineage3.1;lineage4 1
lineage1;lineage4.9 1
lineage4.5 1
lineage4.4.1.1 1
lineage1.1.2 1
spoligotype Counts
spoligotype Count
None 160
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR10809074 HR-TB lineage4.9 None
ERR363490 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR926164 Other lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR4178226 Sensitive lineage4 None
ERR369156 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR926155 Other lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR363456 Sensitive lineage4.9 None
ERR349300 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4769493 Other lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR369158 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675265 Other lineage4 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4178309 Other lineage4.1.2.1 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR369163 Other lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
ERR1063855 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR6359066 HR-TB lineage4.9 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR1063846 HR-TB lineage4.9 None
SRR3675477 Sensitive lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR349264 Other lineage4.9 None
ERR485006 HR-TB lineage4.9 None
SRR6045371 Other lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR926163 Other lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR3675541 Sensitive lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR363447 Other lineage4.9 None
ERR373947 Other lineage4.9 None
SRR6044835 Other lineage4.9 None
ERR2446382 Other lineage4 None
SRR3675260 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR5341396 Other lineage3;lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR3675209 Sensitive lineage4.9 None
ERR11465279 Sensitive lineage4.3.4.1 None
ERR369159 Other lineage4.9 None
ERR363446 Other lineage4.9 None
ERR4796577 HR-TB None
SRR12708416 Sensitive None
ERR369162 Other lineage4.9 None
SRR19128044 HR-TB lineage4.1.1.1 None
ERR363449 Other lineage4.9 None
ERR373945 Other lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR3275450 Other lineage4 None
ERR363499 Other lineage4.9 None
ERR369151 Other lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR363474 Sensitive lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR349330 Sensitive lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
SRR10869011 Sensitive lineage4.1.1.1 None
ERR926160 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR363498 Other lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR323037 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
SRR3675387 Other lineage4.9 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR363453 Other lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
SRR6044819 Sensitive lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR2517475 Other lineage4 None
ERR363500 Other lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
ERR363479 Other lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR6045503 Other lineage4.9 None
ERR349266 Other lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR971389 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR6046385 Sensitive lineage4.9 None
ERR363421 Other lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR926165 Other lineage4.9 None
ERR363506 Sensitive lineage4.9 None
ERR4817793 Sensitive lineage4.1.1.1 gb
SRR3675455 Sensitive lineage4.9 None
ERR4820870 Sensitive lineage4.1.1.1 gb
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR373946 Other lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR16370294 HR-TB lineage4.1.1.1 None
SRR6046897 Sensitive lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4811031 Other lineage4.5 None
ERR3283032 Other lineage4.9 None
ERR4811030 Other lineage4.9 None
ERR349299 Other lineage4.9 None
ERR400326 Other lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR4797193 HR-TB lineage1.1.2 None
SRR24827295 HR-TB lineage4.1.1.1 None
ERR736831 Other lineage4.9 None
ERR11465509 Sensitive lineage4.3.4.2.1 None
ERR3797028 HR-TB M.canetti;lineage4.9 None