lineage | Count |
---|---|
lineage4 | 71 |
48 | |
lineage4.9 | 63 |
lineage4.2.1 | 3 |
lineage4.1.2 | 2 |
lineage4.3.4.2.1 | 2 |
lineage1.1.2 | 1 |
lineage2.2.1 | 10 |
lineage4.9;lineage2.1 | 1 |
lineage4.1 | 2 |
La1.8.1 | 2 |
lineage4.8.1 | 1 |
lineage4.8 | 2 |
lineage4.3.2.1 | 1 |
lineage4.4.1.2 | 1 |
lineage4.1.2.1 | 3 |
lineage4;lineage3.1 | 1 |
lineage4.3.4 | 1 |
lineage4.5 | 1 |
lineage1.1.3.1 | 1 |
lineage4.9;lineage2.2 | 1 |
lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2 | 1 |
lineage4;lineage2.2 | 1 |
lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
lineage1.2.1.1 | 1 |
lineage2.1 | 2 |
spoligotype | Count |
---|---|
None | 226 |
ID | Drug resistance | Lineage | Country iso2 | ERR2228817 | Sensitive | lineage4 | None | SRR5341453 | Sensitive | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2512770 | Other | lineage4.2.1 | None | SRR4035801 | Other | lineage4.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341425 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341315 | Sensitive | None | SRR5341467 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | SRR6045503 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | SRR6046802 | Other | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831638 | Sensitive | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR7535082 | Sensitive | lineage4 | None | ERR5087619 | Other | La1.8.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1035122 | Sensitive | None | ERR323085 | Sensitive | lineage4 | None | ERR1034634 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063858 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283014 | HR-TB | None | ERR3283028 | Other | None | ERR3283031 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3283040 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797087 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR400345 | Other | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4797264 | Sensitive | None | ERR4188247 | HR-TB | None | ERR473332 | Other | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797474 | Other | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4798431 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4812155 | Sensitive | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866639 | Other | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR6866022 | Other | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866410 | Sensitive | None | ERR736872 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736875 | HR-TB | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1172717 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR14801749 | Sensitive | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR13837530 | Sensitive | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR18003015 | MDR-TB | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692822 | Other | lineage4.9 | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR8692800 | Other | lineage4 | None | SRR8692905 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR8692791 | Other | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675265 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675522 | Other | None | ERR181887 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | ERR176651 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR5341384 | Sensitive | lineage4.9 | None |
---|