Rv3596c - c.427_429delTCCinsAGT
Drug resistance types
19 Sensitive
0 RR-TB
23 HR-TB
5 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 14 |
| lineage2.2.1.1 | 2 |
| lineage4 | 9 |
| lineage2.2.1 | 7 |
| 24 | |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.1 | 1 |
| lineage2 | 1 |
| lineage4.9;La3 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.8 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage5.1.4 | 1 |
| lineage2.2 | 4 |
| lineage4.4.2 | 1 |
| lineage4.5 | 1 |
| lineage6.3.1 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 74 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1175496 | HR-TB | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR15368973 | Other | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR20969677 | HR-TB | lineage2 | None | ERR212034 | HR-TB | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675522 | Other | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816151 | Other | lineage4.8 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR25827507 | MDR-TB | lineage4.1.1.1 | None | SRR3675229 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675270 | HR-TB | None | SRR3675279 | Other | None | ERR4816466 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4817893 | Other | lineage4.8;La3 | None | SRR3742665 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | ERR553132 | MDR-TB | lineage4.1.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341302 | HR-TB | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5535933 | HR-TB | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6045053 | Other | None | SRR6046046 | Other | None | SRR6046878 | HR-TB | lineage4 | None | DRR188519 | Other | lineage4.4.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR502908 | HR-TB | lineage2.2.1 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4797313 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4407463 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4811105 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736874 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR4812155 | Sensitive | None | ERR9787139 | Other | lineage6.3.1 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | SRR1169194 | Other | None | SRR1172234 | Other | None |
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