Rv3596c - c.427_429delTCCinsAGT


Drug resistance types
5 Sensitive 2 RR-TB 16 HR-TB 4 MDR-TB 0 Pre-XDR-TB 2 XDR-TB 37 Other
lineage Counts
lineage Count
lineage4.9 20
lineage4.1.2.1 1
lineage2.1;lineage4.9;lineage6.3 3
lineage2.2.1 6
lineage2.2 1
lineage2.2.1.1 2
lineage4.9;lineage6.3 4
La1.7;lineage4.9 2
lineage4.1.1.1 1
La3;lineage2.2.1 1
La1.7.X-unk4;lineage4.9 1
La3;lineage4.9 2
M.canetti;lineage2.2 2
1
lineage2.2.1.2;lineage7 1
lineage4.2.1.1;lineage4.3.3 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.8 1
M.canetti;lineage2.2.2;lineage6.2 2
La3;lineage2.1;lineage4.9 2
La3;lineage1.1.2 1
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage2.1;lineage4.9 1
lineage4.4.2 1
lineage4.1.1.3;lineage4.9 1
lineage4.5 1
lineage6.3.1 1
La3;lineage2 1
lineage4 1
lineage2.2.1;lineage6.3 1
spoligotype Counts
spoligotype Count
None 66
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4769450 Other lineage4.9 None
ERR553132 MDR-TB lineage4.1.2.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675229 Sensitive lineage4.9 None
SRR1180172 Other lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
SRR1183144 Other lineage2.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR502908 HR-TB lineage2.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR25827507 MDR-TB lineage4.1.1.1 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
SRR6046046 Other lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
SRR29017461 Other La3;lineage4.9 None
ERR4769452 Other lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
ERR502912 Other lineage2.2.1 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR28119805 Other lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR6046878 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR4407463 HR-TB None
ERR4811030 Sensitive lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4817893 Other La3;lineage4.8 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
DRR188519 Other lineage4.4.2 None
ERR4816466 HR-TB lineage4.9 None
SRR28119777 Other lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR10808730 Other lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR3675270 Other lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
ERR9787139 Other lineage6.3.1 None
SRR20969677 HR-TB La3;lineage2 None
SRR3675522 Other lineage4.9 None
SRR5535933 Other lineage4.9 None
SRR1169194 Other lineage4.9 None
SRR6045053 Other lineage4 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341330 Other lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None