Rv3696c - c.1146C>G


Drug resistance types
27 Sensitive 7 RR-TB 42 HR-TB 12 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 112 Other
lineage Counts
lineage Count
lineage4.9 74
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.1.1 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 8
La1.7;M.canetti;lineage4.9 3
lineage4.1.2.1 8
La3 1
M.canetti;lineage2.1;lineage4.9 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2.2.1 7
lineage4.1.3 2
lineage4.2;lineage4.6.3;lineage4.9 1
lineage2.1;lineage4.9 7
lineage4.1.2 1
M.canetti;lineage2.1;lineage6.3 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.9;lineage6.3 2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
11
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage1.1.2 1
lineage2.1 3
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage3 2
lineage4.1;lineage4.8 2
La1.6;La3;lineage4.9 1
lineage4.3.3 1
M.canetti;lineage4.9 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage4.3.1;lineage4.9;lineage6 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.9;lineage7 1
La3;lineage2.2.1 1
lineage6.1.3 1
lineage4.1;lineage4.9 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage5.1.4 1
La3;lineage2.1;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.8 1
La3;M.canetti;lineage2.2.1 1
lineage2.2 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage2.1;lineage6.3 1
lineage4 1
lineage4.9;lineage6.1.3 1
lineage5.2 2
lineage4.4.1.1 2
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
La3;lineage2 1
lineage4.1.1.3;lineage4.9 2
lineage4.6.2.2 1
lineage4.5 2
La1.2.BCG 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage6.3.1 1
La3;lineage2.1;lineage4.9 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.6.1.1 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 202
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675477 Sensitive lineage4.9 None
ERR400326 Other lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR3797070 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR6045706 Other lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
SRR1165699 Other lineage4.9 None
SRR1172728 RR-TB La3 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR363509 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR5311097 Other lineage4.2;lineage4.6.3;lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR363447 Other lineage4.9 None
ERR4818347 Other lineage4.1.2 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR373947 Other lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR9786617 Other lineage4.1.1.1 None
ERR363456 Sensitive lineage4.9 None
ERR9786843 Other None
SRR6789626 Other None
ERR4816999 Other None
ERR369162 Other lineage4.9 None
ERR363449 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4188247 HR-TB lineage4.9 None
ERR926165 Other lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
ERR4816466 HR-TB lineage4.9 None
ERR702406 Other lineage2.1 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
ERR926157 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR990545 RR-TB lineage3 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR3283032 Other lineage4.9 None
ERR349299 Other lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR349264 Other lineage4.9 None
SRR3675522 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR9786525 RR-TB lineage4.1;lineage4.8 None
SRR3675221 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR6046299 Other lineage4.3.1;lineage4.9;lineage6 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR9786694 Other lineage4.1.2.1 None
SRR6458423 HR-TB lineage2.2.1 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR10808730 Other lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
ERR9787165 Other lineage6.1.3 None
ERR9786601 Other lineage4.1.2.1 None
ERR363500 Other lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR926155 Other lineage4.9 None
ERR363479 Other lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR971389 Other lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
ERR9786604 Other None
ERR234659 HR-TB None
SRR25827682 Other None
ERR9787197 Other None
SRR3675236 Other None
SRR12708416 Sensitive None
ERR349300 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR9971114 Other lineage2.2.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR373945 Other lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR2514327 HR-TB lineage4.8 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR369158 Other lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR736848 Other lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12142341 HR-TB lineage2.1 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR373946 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
SRR26399490 Sensitive lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1173400 Other lineage4.9 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811030 Other lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR363498 Other lineage4.9 None
SRR1172951 Other lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR108471 HR-TB lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR12708384 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
ERR369160 Sensitive lineage4.9 None
ERR926164 Other lineage4.9 None
ERR363502 Other lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR363453 Other lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR6044819 Sensitive lineage4.9 None
SRR1196546 Other lineage4.9 None
SRR1180137 RR-TB lineage2.2.1 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
ERR349266 Other lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR369159 Other lineage4.9 None
ERR363446 Other lineage4.9 None
ERR9786671 Other None
ERR4407463 HR-TB None
ERR752229 Other lineage4.5 None
SRR1196583 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR4800341 HR-TB lineage3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR363499 Other lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR400320 Sensitive lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR369163 Other lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR1184312 Other lineage2.2.1 None
ERR6358755 Other lineage4.6.1.1 None
SRR1173778 Other lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR349265 Other lineage4.9 None
ERR400345 Other lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR6789621 Other lineage4.9 None
ERR4811031 Other lineage4.5 None