Rv0701 - c.96G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
31 Sensitive
2 RR-TB
14 HR-TB
6 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
24 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.5 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| 4 | |
| lineage4.9 | 34 |
| lineage2.2.1 | 4 |
| La2;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.3.2.1 | 1 |
| La3;lineage4.9 | 2 |
| lineage4.1.2 | 2 |
| lineage4.8 | 1 |
| La1.7;lineage4.9;lineage7 | 1 |
| lineage4.8;lineage4.9 | 2 |
| M.canetti;lineage2.2 | 2 |
| lineage1;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage1 | 1 |
| La1;lineage4.9 | 2 |
| La1.7;lineage4.9 | 2 |
| La3;lineage2.1;lineage4.9 | 1 |
| La2;lineage2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.4.1 | 1 |
| La1.6;lineage4 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 80 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4811031 | Sensitive | lineage4.5 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR1063896 | Sensitive | None | ERR702405 | Sensitive | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR400326 | Other | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR28119827 | Other | La3;lineage4.9 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | ERR9786843 | Other | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | ERR502511 | Sensitive | lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR13285068 | Sensitive | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR6358991 | HR-TB | None | SRR12006550 | Sensitive | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR4811030 | Sensitive | lineage4.9 | None |
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