lineage | Count |
---|---|
lineage4.1 | 1 |
lineage4.9 | 26 |
lineage4 | 16 |
lineage2.2.1 | 4 |
lineage3 | 4 |
10 | |
lineage4.4.1.1 | 1 |
lineage5.1.4 | 1 |
lineage4.2.1 | 1 |
lineage4.1.2.1 | 1 |
La1.8.1 | 3 |
La1.3 | 1 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 70 |
ID | Drug resistance | Lineage | Country iso2 | SRR12708416 | Sensitive | lineage4.1 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR9786076 | Sensitive | lineage3 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR20632814 | Sensitive | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | ERR4815550 | Other | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675547 | Other | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816911 | Other | lineage4.4.1.1 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | ERR2446382 | Other | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5341396 | Other | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR4831638 | Sensitive | None | ERR502943 | HR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | ERR3797060 | Other | La1.8.1 | None | ERR3439489 | RR-TB | La1.8.1 | None | ERR400320 | Sensitive | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR400345 | Other | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4769516 | Other | La1.3 | None | ERR4188247 | HR-TB | None | ERR4596902 | HR-TB | lineage3 | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4812155 | Sensitive | None | ERR736848 | HR-TB | None |
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