lineage | Count |
---|---|
lineage4 | 73 |
lineage4.1.2.1 | 5 |
lineage4.9 | 32 |
lineage2.2.1 | 5 |
lineage4.1 | 1 |
10 | |
lineage4.1.1 | 1 |
lineage4.3.2.1 | 2 |
lineage4.2.1 | 2 |
lineage5.1.4 | 1 |
lineage4.8 | 2 |
lineage1.1.2 | 1 |
lineage4;lineage2.2.1 | 1 |
La2 | 1 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 138 |
ID | Drug resistance | Lineage | Country iso2 | SRR10525364 | MDR-TB | lineage4 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR11033697 | Sensitive | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR16157123 | Other | lineage4.9 | None | SRR16088203 | MDR-TB | lineage2.2.1 | None | SRR14801726 | Other | lineage4 | None | SRR18715222 | HR-TB | lineage4 | None | ERR11082145 | Sensitive | lineage4 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | ERR11083013 | Sensitive | lineage4 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | ERR4815551 | Other | lineage2.2.1 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | ERR4815550 | Other | lineage4 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341396 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR6045503 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4827701 | Other | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4827946 | HR-TB | lineage4 | None | SRR6045706 | Sensitive | lineage4 | None | ERR4827827 | HR-TB | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045909 | Other | lineage4.8 | None | SRR6046802 | Other | lineage4 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6832376 | HR-TB | lineage4 | None | SRR6485131 | Sensitive | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | ERR11067269 | Sensitive | lineage4 | None | ERR4831638 | Sensitive | None | ERR502943 | HR-TB | None | SRR7496471 | Sensitive | None | SRR7131109 | Pre-XDR-TB | lineage4.8 | None | SRR7516389 | Pre-XDR-TB | lineage4 | None | SRR9738486 | MDR-TB | lineage4 | None | SRR7516388 | Pre-XDR-TB | lineage4;lineage2.2.1 | None | ERR349264 | Sensitive | lineage4 | None | SRR7592368 | MDR-TB | lineage4 | None | ERR10430686 | Sensitive | La2 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4811030 | Sensitive | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR133829 | Sensitive | lineage4 | ru | ERR228045 | HR-TB | lineage4 | ru | ERR4798431 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4828816 | MDR-TB | lineage4 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR5865008 | Pre-XDR-TB | lineage4 | None | ERR5865006 | MDR-TB | lineage4 | None | ERR4812155 | Sensitive | None | ERR5865005 | MDR-TB | lineage4 | None | ERR5865007 | Pre-XDR-TB | lineage4 | None | ERR5865010 | MDR-TB | lineage4 | None | ERR5865011 | MDR-TB | lineage4 | None | ERR5865009 | MDR-TB | lineage4 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None |
---|