Rv0701 - c.-119C>T
Drug resistance types
74 Sensitive
0 RR-TB
82 HR-TB
9 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
64 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.1 | 2 |
| lineage2.2.1 | 10 |
| lineage4 | 38 |
| 58 | |
| lineage4.9 | 66 |
| lineage3 | 3 |
| lineage4.1.2.1 | 14 |
| lineage4.3.4.1 | 1 |
| lineage1.1 | 1 |
| lineage4.3.4.2.1 | 3 |
| lineage4.1 | 3 |
| La1.8.1 | 3 |
| lineage4;lineage3.1 | 1 |
| lineage4.9;La1.3 | 2 |
| La1.3 | 3 |
| lineage2.2 | 2 |
| lineage2.2.1.2 | 1 |
| lineage4.5 | 2 |
| lineage4.3.3 | 2 |
| lineage1.1.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage1.1.3.2 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.3.2 | 1 |
| lineage4.8 | 2 |
| La3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage1.1.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage4.3 | 1 |
| lineage2.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4;lineage2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 234 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2229143 | Other | lineage4.1.1 | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR5341373 | HR-TB | lineage4 | None | ERR2509673 | Other | lineage2.2.1 | None | ERR4818929 | HR-TB | None | ERR4818536 | Other | lineage4.9 | None | SRR5341408 | Sensitive | lineage3 | None | SRR5341396 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SAMN02414850 | Other | lineage4.1.2.1 | None | ERR2516626 | Sensitive | lineage4.3.4.1 | None | SRR5341313 | HR-TB | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341315 | Sensitive | None | SRR5341323 | Sensitive | lineage4 | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR5341345 | Sensitive | lineage4.9 | None | ERR2693239 | HR-TB | None | ERR4821053 | Other | lineage3 | None | SRR6045892 | Sensitive | None | SRR6046210 | Other | lineage4 | None | SRR6045519 | HR-TB | None | ERR278594 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6045233 | HR-TB | None | SRR6045399 | Other | None | SRR6325442 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046385 | Other | lineage4.9 | None | SRR6046397 | Other | None | SRR6325444 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | ERR4831638 | Sensitive | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR294248 | HR-TB | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR11465509 | Sensitive | lineage4.3.4.2.1 | None | ERR5311090 | HR-TB | None | SRR7496471 | Sensitive | None | ERR027293 | Other | None | ERR502943 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR1034634 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR10748172 | MDR-TB | lineage4.1.1 | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR133825 | Sensitive | lineage4 | None | ERR3283058 | Other | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797015 | HR-TB | None | ERR3797043 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797082 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR405209 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR400345 | Other | lineage4 | None | ERR4188350 | HR-TB | None | ERR4769408 | Other | La1.3 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769514 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4797313 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR6358951 | HR-TB | lineage4 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR5908228 | Other | lineage4.3.3 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359045 | HR-TB | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866410 | Sensitive | None | SRR21733287 | Sensitive | lineage1.1.2 | None | ERR8976043 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR7821126 | Sensitive | lineage1.1.3.2 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9119096 | Other | lineage4.3.3 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR11462861 | Other | La1.8.1 | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1165423 | Other | lineage4.1.2.1 | None | SRR1167055 | Other | lineage4.1.2.1 | None | SRR1165584 | Other | lineage4.1.2.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1169249 | Other | La3 | None | SRR1167384 | Other | lineage4 | None | SRR1172717 | Other | lineage4.9 | None | SRR1169306 | Other | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR1791696 | Other | La1.8.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | ERR9806975 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025636 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675482 | HR-TB | None | ERR1035239 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | SRR6325445 | HR-TB | None | ERR4815310 | Other | None | SRR3675486 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | ERR176643 | HR-TB | None | ERR4815550 | Other | lineage4 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | SRR3675522 | Other | None | SRR3675383 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675510 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | ERR212033 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816470 | Other | lineage3 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675558 | HR-TB | None | ERR216965 | HR-TB | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816656 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4817667 | HR-TB | lineage4.8 | None |
|---|
