lineage | Count |
---|---|
24 | |
lineage4.9 | 28 |
lineage4.2.1 | 1 |
lineage4 | 12 |
lineage5.1.4 | 1 |
lineage3 | 1 |
lineage4.1.2.1 | 1 |
lineage2.2 | 1 |
lineage4.2.1.1 | 1 |
lineage2.2.1 | 4 |
lineage4.5 | 1 |
lineage4.1 | 1 |
spoligotype | Count |
---|---|
None | 76 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675279 | Other | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675456 | HR-TB | None | SRR3675502 | Other | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675550 | Other | None | SRR3675547 | Other | lineage4.9 | None | SRR3675555 | HR-TB | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5341396 | Other | lineage4 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2517475 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341418 | Other | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6046460 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | ERR4831638 | Sensitive | None | SRR6046482 | HR-TB | None | SRR6046824 | HR-TB | None | ERR4831724 | HR-TB | lineage2.2 | None | SRR6832178 | HR-TB | lineage4.2.1.1 | None | ERR502889 | Other | None | SRR6832249 | Other | lineage2.2.1 | None | SRR6832787 | RR-TB | lineage2.2.1 | None | ERR067681 | HR-TB | None | ERR502943 | HR-TB | None | ERR133986 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR3439432 | Other | None | ERR400326 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4798406 | HR-TB | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR13837507 | HR-TB | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR13837530 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | ERR158583 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None |
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