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SRA data
Rv0005
- c.1861T>C
Drug resistance types
90 Sensitive
1 RR-TB
25 HR-TB
8 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
96
lineage2.2.1
7
La3;lineage4.9
6
M.canetti;lineage4.9
5
lineage4.1.2.1
4
lineage4
4
lineage4.2;lineage4.6.3;lineage4.9.1
2
lineage4.3.2.1
2
La1.7;M.canetti;lineage4.9
2
lineage4.1.1.3;lineage4.9
2
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
163
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR1063855
Other
lineage4.9
None
ERR124636
Sensitive
lineage4.9
None
ERR2026695
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
None
ERR2026696
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
None
ERR2026697
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2026698
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR245675
Sensitive
lineage1.1.2
None
ERR2512770
Sensitive
lineage4.2.1
None
ERR2513283
Sensitive
lineage5.1.4
None
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