Rv3457c - c.-158A>G
Drug resistance types
4 Sensitive
2 RR-TB
17 HR-TB
40 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
56 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti | 34 |
| La2;M.canetti | 1 |
| M.canetti;lineage2.2 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9 | 7 |
| lineage2.1;lineage4.9;lineage6.3 | 3 |
| La3;M.canetti;lineage4.8;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 4 |
| lineage2.1;lineage4.1.1.1;lineage6.3 | 2 |
| lineage4.9;lineage6.3 | 3 |
| lineage4.9 | 14 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 2 |
| La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | 1 |
| La1.7 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La3;M.canetti;lineage3.1 | 1 |
| lineage4.6.2.2 | 1 |
| M.canetti;lineage2.1;lineage3 | 1 |
| M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| 2 | |
| lineage4.8 | 2 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.9 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.1.3 | 2 |
| lineage4.9;lineage9 | 1 |
| lineage4.5 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La2;lineage4.9 | 1 |
| lineage2.2.1 | 1 |
| La3;M.canetti | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| lineage2.1;lineage2.2;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 2 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| lineage2.2 | 1 |
| M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 2 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage3.1.2.1;lineage3.1.2.2 | 1 |
| lineage2.2.1;lineage6.3 | 1 |
| La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | 1 |
| lineage4 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage1.2.1.2.1 | 1 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 120 |
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR266109 | Other | M.canetti | None | ERR3597001 | Other | M.canetti | None | ERR266123 | Other | M.canetti | None | ERR266126 | Other | La2;M.canetti | None | ERR1873396 | Pre-XDR-TB | M.canetti;lineage2.2 | None | ERR4821046 | Other | M.canetti | None | ERR323047 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR8552928 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR038268 | MDR-TB | La3;M.canetti;lineage4.8;lineage4.9 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR1873393 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR6325447 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | SRR5818653 | Other | M.canetti | dj | SRR6325442 | MDR-TB | lineage2.1;lineage4.1.1.1;lineage6.3 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR4817181 | Other | M.canetti | None | ERR926159 | Sensitive | lineage4.9 | None | ERR126600 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR16058674 | Other | M.canetti | None | ERR1034652 | Other | La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 | None | ERR9125475 | Other | M.canetti | None | ERR4817731 | HR-TB | lineage4.9 | None | ERR4830353 | HR-TB | La1.7 | None | ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None | ERR926164 | Other | lineage4.9 | None | SRR10177258 | Other | M.canetti | None | ERR7451301 | Other | M.canetti | None | ERR266108 | Other | M.canetti | None | ERR126608 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR323033 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR926155 | Other | lineage4.9 | None | ERR323054 | MDR-TB | La3;M.canetti;lineage3.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR4814536 | MDR-TB | M.canetti;lineage2.1;lineage3 | None | SRR3675554 | MDR-TB | M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR234659 | HR-TB | None | SRR28393342 | MDR-TB | lineage4.8 | None | SRR18289196 | Other | M.canetti | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR3597003 | Other | M.canetti | None | SRR6046295 | MDR-TB | lineage4.2;lineage4.9 | None | SRR5818567 | Other | M.canetti | dj | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR124652 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | SRR16058668 | Other | M.canetti | None | ERR4815361 | Other | M.canetti | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | ERR323063 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR266110 | Other | M.canetti | None | SRR26112223 | HR-TB | lineage4.8 | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR323060 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR266120 | Other | M.canetti | None | ERR9125480 | Other | M.canetti | None | ERR313115 | Other | M.canetti | None | ERR266121 | Other | M.canetti | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR161033 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR4811031 | Other | lineage4.5 | None | ERR3597007 | Other | M.canetti | None | SRR3675571 | MDR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR313114 | Other | M.canetti | None | ERR126618 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR323039 | MDR-TB | La2;lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | SRR24061598 | Other | M.canetti | None | ERR266122 | Other | La3;M.canetti | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | SRR22179528 | Other | M.canetti | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR987722 | MDR-TB | None | SRR28119805 | Other | lineage4.9 | None | ERR266106 | Other | M.canetti | None | ERR1035239 | MDR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR8976043 | MDR-TB | lineage2.1;lineage2.2;lineage6.3 | None | ERR294248 | MDR-TB | lineage2.1;lineage4.9 | None | SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR266107 | Other | M.canetti | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | ERR124651 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR552304 | Other | M.canetti | None | ERR926165 | Other | lineage4.9 | None | ERR124642 | MDR-TB | M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 | None | ERR3597005 | Other | M.canetti | None | ERR926162 | Sensitive | lineage4.9 | None | ERR926157 | Other | lineage4.9 | None | SRR6325448 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR313113 | Other | M.canetti | None | SRR5818652 | Other | M.canetti | dj | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR987729 | MDR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR5341333 | HR-TB | lineage2.1;lineage4.9 | None | ERR3597002 | Other | M.canetti | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR323064 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR551057 | Other | M.canetti | None | ERR6358837 | MDR-TB | La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None | ERR4816478 | HR-TB | lineage4 | None | SRR6325444 | MDR-TB | M.canetti;lineage2.1;lineage6.3 | None | SRR5818661 | Other | M.canetti | dj | SRR1510066 | RR-TB | lineage1.2.1.2.1 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR133986 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None | SRR6325445 | MDR-TB | M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 | None |
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