Rv3457c - c.-158A>G
Drug resistance types
53 Sensitive
1 RR-TB
126 HR-TB
7 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
68 Other
lineage Counts
| lineage | Count |
|---|---|
| La1 | 2 |
| lineage2 | 2 |
| lineage4.9 | 10 |
| lineage3 | 6 |
| 165 | |
| lineage3.1.2 | 1 |
| lineage2.2 | 5 |
| lineage4.5 | 2 |
| lineage4.6.1.1 | 1 |
| lineage4 | 18 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1 | 10 |
| lineage2.2.1 | 11 |
| lineage4.8;lineage4.1 | 1 |
| lineage4.1.3 | 2 |
| lineage4.6.2.2 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage2.2.1.2 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1.2.1.2.1 | 1 |
| lineage4.1 | 2 |
| lineage3;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.8 | 2 |
| lineage4.1.1.3 | 1 |
| La1.8.1 | 2 |
| lineage5.1.4 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.5;lineage2.2 | 1 |
| lineage5.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| La2 | 1 |
| lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 259 |
Geographic prevalence
Country level data for this variant is available for 15 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4798262 | HR-TB | La1 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4799025 | Pre-XDR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4798406 | HR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811030 | Sensitive | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811105 | HR-TB | None | ERR4812155 | Sensitive | None | ERR4811493 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6359045 | HR-TB | None | ERR6358837 | HR-TB | None | ERR6358991 | HR-TB | None | ERR5336148 | Other | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR702404 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR8976043 | HR-TB | None | ERR736835 | HR-TB | None | ERR736865 | HR-TB | None | ERR736874 | HR-TB | None | ERR702406 | HR-TB | None | ERR7451301 | Sensitive | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR9119669 | HR-TB | None | ERR9117709 | HR-TB | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR9125480 | Sensitive | None | ERR9125600 | Sensitive | lineage2.2.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786604 | Other | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786642 | Other | lineage4.1.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | ERR9786694 | Other | lineage4.1.2.1 | None | ERR9786682 | Other | lineage4.1.2.1 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9787197 | Other | None | SRR1174897 | HR-TB | None | SRR1172310 | HR-TB | None | SRR1173629 | Other | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9896144 | Other | lineage3 | None | SRR1169194 | Other | None | SRR1172951 | Other | None | SRR1173400 | Other | None | SRR1184294 | HR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR12142341 | HR-TB | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR14782405 | HR-TB | None | SRR12416824 | HR-TB | None | SRR1510066 | Other | lineage1.2.1.2.1 | None | SRR16057977 | Sensitive | lineage2.2.1 | None | SRR16058668 | Sensitive | None | SRR20969677 | HR-TB | lineage2 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR3675465 | HR-TB | None | SRR20970016 | Other | lineage2.2 | None | SRR21658551 | Sensitive | lineage2.2.1 | None | SRR22179528 | Sensitive | None | SRR24061598 | Sensitive | None | SRR24061600 | Sensitive | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR24061599 | Sensitive | None | SRR12708416 | Sensitive | lineage4.1 | None | ERR4815604 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR158583 | HR-TB | None | SRR3675482 | HR-TB | None | SRR3675488 | HR-TB | None | ERR4815361 | Sensitive | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675222 | Other | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675221 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675247 | Other | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675236 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675270 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | SRR3675279 | Other | None | SRR3675383 | HR-TB | None | SRR3675501 | HR-TB | None | ERR4816999 | Other | None | SRR3675387 | Sensitive | None | SRR8003010 | MDR-TB | lineage3 | in | ERR2229542 | Other | lineage4.8 | None | SRR3675522 | Other | None | ERR4816019 | Sensitive | None | ERR212123 | Other | None | ERR212034 | HR-TB | None | ERR4817060 | RR-TB | None | SRR3675558 | HR-TB | None | SRR3675571 | HR-TB | None | SRR3675572 | Other | None | ERR212138 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | ERR212121 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR5341418 | Other | None | ERR4817181 | Sensitive | None | ERR4818021 | Other | La1.8.1 | None | ERR4818809 | Sensitive | lineage3 | gb | ERR234659 | HR-TB | None | ERR4818929 | HR-TB | None | ERR2513283 | Other | lineage5.1.4 | None | ERR2512921 | Other | La1.8.1 | gb | ERR4816656 | HR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | ERR4819927 | Sensitive | None | SRR5341302 | HR-TB | None | SRR5341300 | Other | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341333 | HR-TB | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR2199981 | Sensitive | lineage4.3.4.2.1 | sz | SRR5341456 | Other | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | ERR4821046 | Sensitive | None | ERR4821053 | Other | lineage3 | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6045526 | HR-TB | None | SRR6045503 | HR-TB | None | ERR2693257 | Other | None | SRR6045519 | HR-TB | None | SRR5535933 | HR-TB | None | ERR4821946 | Sensitive | lineage2.2.1 | gb | SRR6045706 | Sensitive | lineage4 | None | SRR6045555 | HR-TB | None | ERR4821578 | Other | lineage4.1.2.1 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR5818605 | Sensitive | None | SRR5818567 | Sensitive | dj | SRR5818614 | Sensitive | dj | SRR5818652 | Sensitive | dj | SRR5818653 | Sensitive | dj | SRR5818676 | Sensitive | dj | SRR5818661 | Sensitive | dj | SRR5818668 | Sensitive | dj | SRR6046133 | HR-TB | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR5818685 | Sensitive | None | SRR6044790 | HR-TB | None | SRR6045053 | Other | None | SRR6045952 | HR-TB | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6046046 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6045233 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046305 | Other | lineage4.9 | None | SRR6325442 | HR-TB | None | ERR278594 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046362 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR3275196 | Other | lineage2.2.1 | nl | ERR4830353 | Other | None | ERR4829537 | Other | lineage4.8 | it | ERR4829606 | Sensitive | lineage4.1.2.1 | None | SRR6046482 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6325448 | HR-TB | None | ERR323036 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR4831763 | HR-TB | lineage4.5;lineage2.2 | None | ERR3170397 | Sensitive | lineage5.1.1 | None | ERR4831117 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR502532 | HR-TB | None | ERR4831794 | MDR-TB | lineage2.2.1.1 | None | SRR6964581 | Sensitive | lineage3 | None | ERR502524 | HR-TB | La2 | None | SRR6789626 | Other | None | ERR294248 | HR-TB | None | ERR294266 | HR-TB | None | ERR5311090 | HR-TB | None | ERR502889 | Other | None | SRR8217918 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR323041 | HR-TB | None | SRR7496509 | Other | None | SRR7585435 | Other | lineage4.9 | None | ERR323038 | HR-TB | None | ERR323039 | HR-TB | None | ERR067681 | HR-TB | None | ERR323053 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323055 | HR-TB | None | ERR323063 | HR-TB | None | ERR1034652 | Other | None | ERR1023525 | HR-TB | lineage4 | None | ERR3283024 | Other | None | ERR133986 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283017 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283027 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR3468544 | HR-TB | None | ERR3597003 | Sensitive | None | ERR369158 | Sensitive | lineage4 | None | ERR3597001 | Sensitive | None | ERR3597007 | Sensitive | None | ERR3597005 | Sensitive | None | ERR3597002 | Sensitive | None | ERR363449 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797016 | HR-TB | None | ERR373947 | Sensitive | lineage4 | None | ERR3797017 | Other | None | ERR3797014 | Other | None | ERR3804155 | Other | lineage4.1.2.1 | None | ERR3797043 | HR-TB | None | ERR3797044 | Other | None | ERR3797036 | HR-TB | None | ERR3797061 | Other | None | ERR400320 | Sensitive | lineage4 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR387051 | HR-TB | None | ERR4178226 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4769452 | HR-TB | None | ERR4769450 | HR-TB | None |
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