Rv3596c - c.1140G>T


Drug resistance types
33 Sensitive 1 RR-TB 8 HR-TB 4 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 30 Other
lineage Counts
lineage Count
lineage4.9 39
lineage2.2.1 5
2
lineage3;lineage4.9 1
lineage1.1.1;lineage4 1
lineage4.2.1 1
lineage4.2;lineage4.9 1
lineage2.2 1
lineage4.3.3 2
lineage2.1 2
lineage2.2.1;lineage4 1
lineage4.1;lineage4.9 1
lineage4.4.1.1 1
lineage2.1;lineage4.9 3
lineage3 1
lineage4 2
lineage1.1.2 1
lineage1;lineage4.9 1
La3;lineage2.1;lineage4.9;lineage6.3 3
lineage4.5 1
lineage4.3.4.2.1 1
M.canetti;lineage2.1;lineage4.9 1
lineage3.1.1 1
lineage5.1.4 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.2.1.1;lineage4.3.3 1
spoligotype Counts
spoligotype Count
None 76
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR369161 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR400336 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
SRR3675247 Other lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR12708416 Sensitive None
SRR5341396 Other lineage3;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR2512770 Sensitive lineage4.2.1 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR1196583 Other lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
SRR12708409 HR-TB lineage4.3.3 None
SRR1710057 Other lineage2.1 None
SRR3675580 Sensitive lineage4.9 None
SRR3675522 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR3675455 Sensitive lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
SRR12708374 Sensitive lineage4.1;lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR400326 Other lineage4.9 None
ERR3797043 Sensitive lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR2514552 Sensitive lineage3 None
ERR2446382 Other lineage4 None
SRR12708372 Sensitive lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR3283018 HR-TB lineage4.9 None
SRR1172857 Other None
SRR3675477 Sensitive lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR3283042 Other lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811030 Sensitive lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR369151 Other lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR400345 Other lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR1196546 Other lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR1173400 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR2513283 Sensitive lineage5.1.4 None
SRR12708419 Other lineage4.3.3 None
ERR4797313 Sensitive lineage2.2.1 None
SRR1196566 Other lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR3275450 Other lineage4 None
ERR400320 Sensitive lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR12708384 Sensitive lineage4.9 None