Rv3596c - c.1140G>T
Drug resistance types
35 Sensitive
1 RR-TB
9 HR-TB
2 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
30 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 41 |
| lineage2.2.1 | 6 |
| lineage3.1.1 | 1 |
| lineage2.1;lineage4.9 | 3 |
| lineage4 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 2 |
| lineage4.3.3 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage4.2;lineage4.9 | 1 |
| lineage2.1 | 2 |
| lineage1.1.2 | 1 |
| lineage3 | 1 |
| lineage4.2.1 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| 3 | |
| lineage4.3 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage5.1.4 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.5 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 78 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341345 | Sensitive | lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | SRR1196474 | Other | lineage3.1.1 | None | ERR400326 | Other | lineage4.9 | None | SRR1196546 | Other | lineage4.9 | None | ERR3797043 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR1196566 | Other | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | SRR1196583 | Other | lineage4.9 | None | SRR1710057 | Other | lineage2.1 | None | ERR3275450 | Other | lineage4 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR3416776 | Other | lineage2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR1173400 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR3283042 | Other | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | SRR12708399 | MDR-TB | lineage4.3.4.2.1 | None | ERR369151 | Other | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR3675279 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR4811142 | RR-TB | None | ERR400336 | Sensitive | lineage4.9 | None | ERR867542 | HR-TB | lineage4.3 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | SRR12708416 | Sensitive | None | ERR3283018 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | SRR1172857 | Other | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR12708384 | Sensitive | lineage4.9 | None |
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