lineage | Count |
---|---|
30 | |
lineage4 | 16 |
lineage3.1 | 2 |
lineage4.3.3 | 2 |
lineage2.1 | 2 |
lineage4.9 | 31 |
lineage2.2.1 | 5 |
lineage4.1 | 1 |
lineage5.1.4 | 1 |
La1.2.BCG | 1 |
lineage4.2.1 | 1 |
lineage3 | 1 |
lineage4.1.2.1 | 1 |
lineage1.1.2 | 1 |
lineage2.2 | 1 |
lineage4.5 | 1 |
spoligotype | Count |
---|---|
None | 97 |
ID | Drug resistance | Lineage | Country iso2 | SRR19304036 | HR-TB | None | SRR1172951 | Other | None | SRR1173153 | HR-TB | None | SRR1173400 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173629 | Other | None | SRR1173778 | Other | None | SRR1175049 | RR-TB | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1184294 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1710057 | Other | lineage2.1 | None | SRR1172857 | MDR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173788 | Other | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR13837507 | HR-TB | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3416776 | Other | lineage2.1 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR3675571 | HR-TB | None | ERR4818908 | Other | La1.2.BCG | None | ERR2512770 | Other | lineage4.2.1 | None | SRR5341323 | Sensitive | lineage4 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341396 | Other | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4831719 | MDR-TB | lineage2.2.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4831638 | Sensitive | None | ERR3797043 | HR-TB | None | ERR502943 | HR-TB | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR3283058 | Other | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR400336 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797313 | HR-TB | None | ERR400345 | Other | lineage4 | None | ERR4811022 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811142 | MDR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR9119669 | HR-TB | None | ERR4812155 | Sensitive | None |
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