EBG00000313339 - n.280C>T


Drug resistance types
34 Sensitive 30 RR-TB 45 HR-TB 76 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 81 Other
lineage Counts
lineage Count
lineage4.9 113
La1;lineage4.9 2
M.canetti;lineage2.1;lineage4.9 16
La1;lineage4.1.2 1
lineage4.2;lineage4.9 1
lineage2.2.1.1 4
lineage2.2.1 16
La3;M.canetti;lineage2.1;lineage4.9 12
lineage3 4
lineage3;lineage4.9 1
La3;M.canetti;lineage3.1 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
lineage2.2 2
lineage1.1.3.1 1
3
La3;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
lineage2.1;lineage4.9 4
M.canetti;lineage2.1;lineage4 1
lineage4.1.2.1 16
lineage4.9.1 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.1.2 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 2
lineage4.6.4 2
M.canetti;lineage2.2 1
La3;M.canetti;lineage4.8;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.1;lineage4.1.1.1;lineage6.3 2
M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.3.3 3
lineage4.1.2.1.1 1
lineage4.4.1.1 3
lineage2.1;lineage4.3.2 1
lineage4.9;lineage7 1
M.canetti;lineage4.9 1
lineage4.1;lineage4.9 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.3.4.2.1 1
La3;lineage4.9 2
lineage1.1 1
La1.7.1 1
La1.2.BCG 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
lineage4.1.1.3;lineage4.9 2
lineage4.2.1.1;lineage4.3.3 1
lineage2.2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage3.1 1
La1;lineage2;lineage4.9 1
lineage4.9;lineage6.1.3 1
lineage4.5 3
lineage4.3.2.1 2
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 1
lineage1.1.1 1
La1.7 1
M.canetti;lineage2.1 1
lineage2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage3 1
lineage2.1;lineage2.2;lineage6.3 1
La1.7;lineage4.9 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.8.1 2
lineage4.8 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
lineage4 1
lineage2.2.1.2;lineage7 1
M.canetti;lineage2.1;lineage4.1.2.1 1
spoligotype Counts
spoligotype Count
None 269
Geographic prevalence
Country level data for this variant is available for 7 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR8665994 RR-TB lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR5311099 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4828872 RR-TB lineage4.2;lineage4.9 None
SRR6044819 Sensitive lineage4.9 None
ERR373947 Other lineage4.9 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR13861332 Other lineage4.9 None
ERR2509673 Other lineage2.2.1 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
SRR5341396 Other lineage3;lineage4.9 None
ERR3275196 RR-TB lineage2.2.1 nl
SRR1183106 RR-TB lineage2.2.1.1 None
SRR1183144 RR-TB lineage2.2.1 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR323054 MDR-TB La3;M.canetti;lineage3.1 None
SRR3675464 MDR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR6045503 Other lineage4.9 None
ERR970445 MDR-TB lineage2.2.1 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR971389 Other lineage4.9 None
ERR8479578 HR-TB lineage1.1.3.1 None
ERR1063896 HR-TB None
ERR2693229 RR-TB La3;M.canetti;lineage4.9 None
SRR6325445 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR176766 MDR-TB lineage2.1;lineage4.9 None
ERR363449 Other lineage4.9 None
ERR373945 Other lineage4.9 None
SRR5341330 Other lineage4.9 None
ERR2693239 RR-TB M.canetti;lineage2.1;lineage4 None
ERR369157 Sensitive lineage4.9 None
SRR1167055 Other lineage4.1.2.1 None
ERR369151 Other lineage4.9 None
ERR2446118 RR-TB lineage4.1.2.1 nl
ERR702405 HR-TB lineage4.9 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR5311081 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR245758 Other lineage4.9.1 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR9970980 HR-TB lineage4.1.2 None
SRR20969708 HR-TB lineage2.2 None
ERR926165 Other lineage4.9 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR5311098 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323063 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1163221 MDR-TB lineage4.1.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
ERR926154 Sensitive lineage4.9 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR6325448 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR369163 Other lineage4.9 None
ERR4872102 MDR-TB lineage4.6.4 None
ERR323115 Sensitive lineage4.9 None
ERR1873396 Pre-XDR-TB M.canetti;lineage2.2 None
ERR323047 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR323060 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR373946 Other lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR400345 Other lineage4.9 None
ERR176658 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2517528 RR-TB lineage3 nl
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR161033 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR1873393 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6511621 HR-TB lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR3675318 Other lineage4.9 None
ERR1035122 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR323107 HR-TB lineage4.9 None
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR3675541 Sensitive lineage4.9 None
SRR12708409 HR-TB lineage4.3.3 None
ERR760733 MDR-TB lineage4.1.2.1.1 None
SRR5341453 Other lineage4.9 None
SRR1173767 MDR-TB lineage4.4.1.1 None
SRR1181091 Other lineage2.2.1.1 None
ERR4812155 Other lineage4.9 None
ERR363445 Other lineage4.9 None
SRR6044815 RR-TB lineage4.9 None
ERR3275215 RR-TB lineage4.1.2.1 nl
ERR323055 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1162864 MDR-TB lineage4.1.2.1 None
ERR772255 MDR-TB lineage2.1;lineage4.3.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
ERR3797046 HR-TB lineage4.9 None
ERR363447 Other lineage4.9 None
SRR1158918 Other lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR5311102 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR1173777 Sensitive lineage4.9 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR970413 MDR-TB lineage2.2.1 None
ERR323044 HR-TB lineage4.3.4.2.1 None
ERR363500 Other lineage4.9 None
ERR5908228 RR-TB lineage4.3.3 None
SRR1238558 Other lineage4.9 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3077978 RR-TB lineage1.1 None
SRR5341299 HR-TB lineage4.9 None
SRR7240492 MDR-TB La1.7.1 None
ERR926155 Other lineage4.9 None
SRR1915487 Other La1.2.BCG None
ERR4800527 MDR-TB lineage2.2.1 None
SRR3675209 Sensitive lineage4.9 None
SRR1165584 Other lineage4.1.2.1 None
ERR926161 Sensitive lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR1640750 RR-TB None
ERR323040 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR1165506 Other lineage4.1.2.1 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1175496 Sensitive lineage4.9 None
ERR2693252 HR-TB lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR323034 MDR-TB La3;M.canetti;lineage2.1;lineage3.1 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR13861176 Other lineage4.9 None
SRR3675482 RR-TB lineage4.9 None
ERR363474 Sensitive lineage4.9 None
SRR7535082 Other lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
SRR3675444 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR067699 HR-TB La1;lineage2;lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR3445504 Other lineage4.9;lineage6.1.3 None
ERR386953 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR14801749 HR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR926160 Other lineage4.9 None
ERR4811031 Other lineage4.5 None
ERR3283011 Other La3;lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR323058 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR1166821 RR-TB lineage4.1.2.1 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR323062 HR-TB lineage4.9 None
SRR6325442 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR363498 Other lineage4.9 None
ERR926163 Other lineage4.9 None
ERR751326 Other lineage4.9 None
ERR2229143 RR-TB lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR6358837 MDR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR363490 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR926164 Other lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
SRR5341437 Sensitive lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
ERR363453 Other lineage4.9 None
SRR21658550 Other lineage1.1.1 None
SRR1180147 RR-TB lineage2.2.1.1 None
SRR3675222 Other La1.7 None
ERR323041 MDR-TB M.canetti;lineage2.1 None
SRR1165423 RR-TB lineage4.1.2.1 None
SAMN02414850 Other lineage4.1.2.1 None
ERR3468607 RR-TB lineage4.9 None
SRR3675508 MDR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1180172 RR-TB lineage2.2.1 None
ERR5311090 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR736834 HR-TB lineage4.9 None
ERR473314 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4814536 MDR-TB M.canetti;lineage2.1;lineage3 None
ERR323038 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
ERR369159 Other lineage4.9 None
ERR108125 RR-TB lineage4.9 None
SRR12708416 Sensitive None
ERR752229 Other lineage4.5 None
ERR369162 Other lineage4.9 None
ERR278594 MDR-TB lineage2.1;lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR13861510 Other lineage4.9 None
ERR779852 HR-TB lineage4.9 None
ERR9119508 MDR-TB lineage4.6.4 None
SRR3675507 RR-TB lineage4.9 None
ERR8976043 MDR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR13423649 Other lineage2.2.1 None
ERR9786911 HR-TB lineage4.1.2.1 None
SRR1173453 Other lineage4.4.1.1 None
SRR10808668 Other lineage2.2.1 None
ERR363421 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR349296 Sensitive lineage4.9 None
SRR1162740 Other lineage4.1.2.1 None
ERR3797083 RR-TB lineage4.9 None
SRR13861596 Other lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR926156 Other lineage4.9 None
ERR2693228 RR-TB lineage4.9 None
ERR3275220 Other lineage3 nl
ERR363506 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
SRR1791696 RR-TB La1.8.1 None
SRR5341300 HR-TB lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR369161 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR13861381 HR-TB lineage4.9 None
ERR3797016 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR3675506 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797023 MDR-TB La1.8.1 None
ERR3283016 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR323066 HR-TB lineage4.9 None
SRR11662694 Other lineage4.9 None
SRR3675486 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
SRR5341308 HR-TB lineage4.9 None
ERR4811030 Other lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR400326 Other lineage4.9 None
ERR5311082 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
ERR323036 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR6458421 MDR-TB lineage2.2.1 None
SRR5341323 Sensitive lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR2446566 Other lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR1023295 MDR-TB M.canetti;lineage2.1;lineage4.1.2.1 None
ERR2517489 Sensitive lineage4.1.2.1 nl
SRR6045706 Other lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3468544 RR-TB lineage2.1;lineage4.9 None
ERR2446144 Other lineage3 nl