Rv3596c - c.372G>C
Drug resistance types
93 Sensitive
4 RR-TB
23 HR-TB
7 MDR-TB
2 Pre-XDR-TB
1 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 63 |
| lineage4 | 56 |
| 15 | |
| lineage3 | 1 |
| lineage5.1.4 | 1 |
| lineage4.2.1 | 2 |
| lineage4.1.2.1 | 1 |
| lineage2.2.1 | 6 |
| lineage4.6.1.1 | 1 |
| La1.8.1 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage4.5 | 1 |
| lineage4.7 | 1 |
| lineage4.3.3 | 1 |
| lineage4.9;lineage2.2 | 1 |
| lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| La1.7.1 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 157 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4815310 | Other | None | SRR3675477 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | ERR4815550 | Other | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675547 | Other | lineage4.9 | None | SRR3675522 | Other | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | ERR212138 | HR-TB | lineage4 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4817915 | RR-TB | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4819051 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR6045706 | Sensitive | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341315 | Sensitive | None | SRR5341323 | Sensitive | lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6045010 | Other | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044780 | Other | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046617 | HR-TB | lineage2.2.1 | None | SRR6046802 | Other | lineage4 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR4831638 | Sensitive | None | ERR502943 | HR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | ERR036207 | Other | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR363453 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4188247 | HR-TB | None | ERR4178226 | Sensitive | lineage4 | None | ERR4798431 | HR-TB | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811030 | Sensitive | None | ERR6865502 | Sensitive | lineage4 | None | ERR4812155 | Sensitive | None | ERR5917985 | MDR-TB | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | ERR9992879 | XDR-TB | lineage4.3.3 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175513 | Other | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180446 | Other | lineage4.9 | None | SRR1180440 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None |
|---|
