Rv0667 - c.2127G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
63 Sensitive
5 RR-TB
17 HR-TB
5 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
35 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 71 |
| lineage4 | 3 |
| 4 | |
| lineage4.1.1.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage2.2.1 | 8 |
| M.canetti;lineage4.9 | 2 |
| lineage2.2.1.1 | 5 |
| lineage1.2.1.2.1 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage4.5 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.8 | 2 |
| lineage3 | 3 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.2;lineage4.9 | 2 |
| lineage4.1;lineage4.9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| lineage2;lineage4.9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage4.3 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1;lineage4.9 | 2 |
| lineage1.1.1;lineage4 | 1 |
| lineage1.2.2.1;lineage4.4.1.1 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage1.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 127 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341345 | Sensitive | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4797201 | Other | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR12708416 | Sensitive | None | ERR349296 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | ERR234659 | Other | None | ERR2516789 | HR-TB | lineage1.2.1.2.1 | gb | ERR2516892 | HR-TB | lineage1.2.1.2.1 | gb | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR363479 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR6045219 | HR-TB | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4178226 | Sensitive | lineage4 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR373947 | Other | lineage4.9 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR29050928 | Other | lineage4.9 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR6046485 | Other | lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR28044634 | Other | lineage3 | None | SRR10808730 | Other | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR349299 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675441 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR363447 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR11252664 | Other | lineage2.2.1 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6045555 | Other | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | ERR4798823 | HR-TB | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR3675279 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None |
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