EBG00000313339 - n.529delA


Drug resistance types
81 Sensitive 9 RR-TB 14 HR-TB 9 MDR-TB 4 Pre-XDR-TB 0 XDR-TB 49 Other
lineage Counts
lineage Count
lineage4.9 42
La1.4 1
lineage1.2.1.2 1
lineage2.2.1.1 3
lineage2.2.1 13
lineage4.1.2.1 8
lineage1.1.1 1
lineage4.1 1
13
lineage4 53
lineage3.1.2.1 4
lineage3 6
lineage4.1.3;lineage4.1.2.1;lineage1.1.2 1
lineage4.6 1
lineage1.1.2 2
lineage4.2.1 3
lineage4.3.2.1 2
lineage4.2 1
lineage4.2.1.1 1
lineage4.5;lineage2.2 1
lineage4.3.3 2
La1.2 2
lineage5.1.2 1
lineage4.4.1.1 1
lineage2.2 1
lineage4.5 1
spoligotype Counts
spoligotype Count
None 166
Geographic prevalence
Country level data for this variant is available for 4 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR16156775 Other lineage4.9 None
SRR16278274 Other La1.4 None
SRR16157123 Other lineage4.9 None
SRR20969475 Other lineage1.2.1.2 None
SRR18002887 MDR-TB lineage2.2.1.1 None
SRR18003031 HR-TB lineage2.2.1 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR18002901 MDR-TB lineage2.2.1 None
SRR18909918 Other lineage2.2.1.1 None
SRR21240055 Other lineage4.1.2.1 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675473 Sensitive lineage4.9 None
SRR21658550 Other lineage1.1.1 None
SRR12708416 Sensitive lineage4.1 None
SRR3675472 Sensitive lineage4.9 None
SRR3675209 Sensitive lineage4.9 None
ERR4815310 Other None
SRR3675477 Other lineage4.9 None
ERR3275450 Other lineage4 None
SRR3675210 Sensitive lineage4.9 None
SRR3675229 Other lineage4 None
SRR3675247 Other lineage4.9 None
SRR3675279 Other None
SRR3675266 Sensitive lineage4.9 None
SRR3675292 Sensitive lineage4 None
SRR3675283 Sensitive lineage4.9 None
SRR3675514 Sensitive lineage4.9 None
ERR4815550 Other lineage4 None
SRR3675318 Other lineage4.9 None
ERR4815022 Other lineage3.1.2.1 None
SRR3675387 Sensitive None
SRR3675522 Other None
ERR4816001 Other lineage3 None
SRR3675537 Sensitive lineage4.9 None
SRR3675527 RR-TB lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675542 Other lineage4.9 None
SRR3675553 Sensitive lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
ERR4816100 Sensitive lineage4.1.3;lineage4.1.2.1;lineage1.1.2 None
SRR3675577 Sensitive lineage4.9 None
ERR4816699 Other lineage4.6 None
ERR4816571 Other lineage1.1.2 None
ERR4819017 RR-TB lineage3 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR4816831 Other lineage4.1.2.1 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR5152914 MDR-TB lineage2.2.1 None
ERR4818831 Other lineage3 None
ERR2512770 Other lineage4.2.1 None
ERR4820290 Other lineage3 None
SRR5341396 Other lineage4 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR5341437 Sensitive lineage4.9 None
ERR4820729 Other lineage2.2.1 None
ERR4820362 Sensitive lineage4.2 None
SRR6152838 Other lineage2.2.1.1 ca
ERR2515848 Sensitive lineage2.2.1 None
SRR5341267 Pre-XDR-TB lineage3 None
ERR2446382 Other lineage4 None
SRR5341296 Sensitive lineage4.9 None
ERR4820043 Sensitive lineage4.1.2.1 None
SRR5341323 Sensitive lineage4 None
ERR2515013 Sensitive lineage2.2.1 None
SRR5341345 Sensitive lineage4.9 None
SRR6045503 HR-TB None
ERR2517475 Other lineage4 None
ERR4820193 Other lineage3 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR6045706 Sensitive lineage4 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR6045944 Other lineage4.1.2.1 None
SRR6044819 Sensitive lineage4.9 None
SRR6045371 Sensitive lineage4.2.1 None
SRR6045267 RR-TB lineage4 None
SRR6046802 Other lineage4 None
SRR6046245 Other lineage4.9 None
SRR6046611 HR-TB lineage4.9 None
SRR6046863 Sensitive lineage1.1.2 None
ERR502470 RR-TB lineage4.9 None
SRR6046897 Sensitive lineage4 None
SRR6397640 Other lineage4.2.1.1 None
ERR4831638 Sensitive None
ERR4814994 HR-TB lineage2.2.1 gb
ERR4831839 MDR-TB lineage2.2.1 None
ERR4831763 HR-TB lineage4.5;lineage2.2 None
SRR6855708 Sensitive lineage2.2.1 None
SRR6832644 Other lineage4.3.3 None
SRR9971114 Other lineage2.2.1 None
ERR502943 HR-TB None
SRR7755654 Pre-XDR-TB lineage4.2.1 None
SRR7851312 Other La1.2 None
ERR10796632 Other lineage4.3.3 None
ERR1023525 HR-TB lineage4 None
ERR10796597 Other lineage4 None
ERR3283025 HR-TB None
ERR4820798 Other lineage3.1.2.1 gb
ERR349299 Sensitive lineage4 None
ERR349265 Sensitive lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4 None
ERR349298 Sensitive lineage4 None
ERR349296 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR349330 Sensitive lineage4 None
ERR363421 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR363506 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR369151 Sensitive lineage4.9 None
ERR369156 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR369159 Sensitive lineage4 None
ERR369162 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369163 Sensitive lineage4 None
ERR4797350 Sensitive lineage4.9 None
ERR373945 HR-TB lineage4 None
ERR400320 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR4178226 Sensitive lineage4 None
ERR4178309 Other lineage4.1.2.1 None
ERR4769418 Other La1.2 None
ERR4769433 Pre-XDR-TB lineage4.9 None
ERR373946 Sensitive lineage4 None
ERR373947 Sensitive lineage4 None
ERR3797086 Other lineage4.9 None
ERR400326 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR400538 RR-TB lineage5.1.2 None
ERR4797313 HR-TB None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR4798898 MDR-TB lineage3.1.2.1 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4810624 HR-TB lineage2.2 None
ERR4798431 HR-TB None
ERR6197024 RR-TB lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR4812155 Sensitive None
ERR4811030 Sensitive None
ERR6865502 Sensitive lineage4 None
ERR6197030 Other lineage4.9 None
ERR6197040 Other lineage4.9 None
ERR6197042 RR-TB lineage4.9 None
ERR6197044 RR-TB lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
SRR1175496 HR-TB lineage4.9 None
ERR9119669 HR-TB None
SRR1175507 MDR-TB lineage4 None
SRR1175500 MDR-TB lineage4 None
SRR1175508 Other lineage4.9 None