EBG00000313339 - n.529delA
Drug resistance types
41 Sensitive
4 RR-TB
4 HR-TB
8 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
60 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 70 |
| lineage4.5 | 1 |
| lineage2.2.1 | 7 |
| lineage4.4.1.1 | 2 |
| lineage1.2.1.2 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1;lineage4.9 | 2 |
| La1.4 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.1.2.1 | 4 |
| lineage2.2.1.1 | 1 |
| lineage4.2.1.1 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage3 | 2 |
| La1.2 | 2 |
| La1.8.1 | 1 |
| lineage5.1.2 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage3.1.2.1 | 2 |
| lineage2.2 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.3.3;lineage4.9 | 1 |
| lineage4.3.3 | 2 |
| lineage4 | 3 |
| 1 | |
| lineage4.3.2.1 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 119 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1175508 | Sensitive | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | SRR5152914 | MDR-TB | lineage2.2.1 | None | ERR349299 | Other | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR20969475 | Other | lineage1.2.1.2 | None | ERR363498 | Other | lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR363446 | Other | lineage4.9 | None | ERR349300 | Other | lineage4.9 | None | ERR363449 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR363421 | Other | lineage4.9 | None | SRR21240055 | Other | lineage4.1.2.1 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR7069391 | Other | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR6397640 | Other | lineage4.2.1.1 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | SRR14801759 | MDR-TB | La1.7;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR363490 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4818831 | Other | lineage3 | None | SRR7236330 | Other | La1.8.1 | None | SRR16156775 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | SRR7851312 | Other | La1.2 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | ERR369159 | Other | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4820798 | Other | lineage3.1.2.1 | gb | ERR4810624 | MDR-TB | lineage2.2 | None | ERR373945 | Other | lineage4.9 | None | SRR1175496 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR4815022 | Other | lineage3.1.2.1 | None | ERR369163 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR9119669 | MDR-TB | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR373946 | Other | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR4814994 | HR-TB | lineage2.2.1 | gb | ERR4812155 | Other | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR6832644 | Other | lineage4.3.3;lineage4.9 | None | ERR10796597 | Other | lineage4.3.3 | None | ERR4178226 | Sensitive | lineage4 | None | ERR363453 | Other | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR363500 | Other | lineage4.9 | None | SRR1238558 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR363479 | Other | lineage4.9 | None | SRR6045503 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR10796632 | Other | lineage4.3.3 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | None | SRR6046611 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR363499 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | SRR7755654 | Pre-XDR-TB | lineage4.2.1 | None | ERR6865502 | Sensitive | lineage4 | None |
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