TB-Profiler
Home
Upload
SRA data
Rv3596c
- c.249C>T
Drug resistance types
45 Sensitive
4 RR-TB
30 HR-TB
10 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
27 Other
lineage Counts
Show
10
25
50
100
entries
Search:
lineage
Count
lineage
Count
lineage4.9
42
lineage2.2.1
12
La3;lineage4.9
6
lineage3
4
lineage4.8
4
lineage4.2;lineage4.9
3
2
lineage4.3.2.1
2
lineage6.1.1
2
lineage4.2;lineage4.6.3;lineage4.9.1
2
Showing 1 to 10 of 46 entries
Previous
1
2
3
4
5
Next
spoligotype Counts
Show
10
25
50
100
entries
Search:
spoligotype
Count
spoligotype
Count
None
119
Showing 1 to 1 of 1 entries
Previous
1
Next
Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Leaflet
| Map tiles by
Stamen Design
,
CC BY 3.0
— Map data ©
OpenStreetMap
contributors
Statisctical support
Not enough data to calculate support.
Samples
Show
10
25
50
100
entries
Search:
ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1023525
HR-TB
La1.7;lineage4.9
None
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR11466061
Sensitive
lineage4.9.1
None
ERR11466070
Sensitive
lineage4.3.4.1
None
ERR2513283
Sensitive
lineage5.1.4
None
ERR2660539
Other
lineage4.9
None
ERR294266
HR-TB
lineage4.2;lineage4.8.1;lineage4.9
None
ERR323056
HR-TB
lineage4.4.1.2
None
ERR3283011
Other
La3;lineage4.9
None
ERR3283026
HR-TB
lineage4.2;lineage4.6.3;lineage4.9.1
None
Showing 1 to 10 of 119 entries
Previous
1
2
3
4
5
…
12
Next