Rv0668 - c.3552G>C


Drug resistance types
47 Sensitive 3 RR-TB 24 HR-TB 14 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 62 Other
lineage Counts
lineage Count
lineage3 4
lineage2.2.1 8
lineage4.9 65
La3;lineage4.9 7
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.2.1 2
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.3.2.1 1
La1;lineage4.1.2 1
lineage4.3.4.1 2
lineage2.2 3
La1.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
M.canetti;lineage4.2 1
lineage5.1.4 1
1
La1;lineage4.9 3
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.6.4;lineage4.9 2
lineage4.2.1.1;lineage4.3.3 1
La3;lineage4 1
lineage4.1.2 1
lineage4 2
lineage4.6.3;lineage4.9 2
lineage4.1;lineage4.8 2
La1.2;La1.8.1 1
lineage4.6.2.2 2
M.canetti;lineage2.2.2;lineage6.2 2
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage1.1.3.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.9;lineage7 4
lineage1.2.1.2 1
lineage2.1;lineage4.9;lineage7 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage2.2.1.2;lineage7 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
lineage4.8 3
lineage4.1.1.2 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage1.1.2 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 1
La1.2.BCG 1
lineage1;lineage4.9 1
lineage4.5 1
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2.2 1
spoligotype Counts
spoligotype Count
None 151
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR2513259 Other lineage3 None
SRR20969731 Other lineage2.2.1 None
SRR6045548 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4769450 Other lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR2041726 MDR-TB lineage4.1.2.1 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR990545 Other lineage3 None
ERR971389 Sensitive lineage4.9 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR4812155 Other lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR11465352 Sensitive lineage4.3.4.1 None
SRR6832249 Sensitive lineage2.2.1 None
ERR4769452 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR23961549 Other La1.2 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR2513283 Sensitive lineage5.1.4 None
ERR4811493 HR-TB lineage4.9 None
ERR9786843 Other None
ERR4769497 Other La1;lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR926165 Sensitive lineage4.9 None
SRR6046878 Other lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
SRR3675270 Other lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
ERR3283028 Other La3;lineage4 None
ERR400320 Sensitive lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
SRR6045053 Other lineage4 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR14782054 Other lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR2446566 Other lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR926158 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR10808805 Other La1;lineage4.9 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR926163 Other lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR1023509 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR6046382 Sensitive lineage2.2.1 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR3797029 Other lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675522 Other lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR926160 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR12015085 Other lineage4.8 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR7496471 Sensitive lineage4 None
ERR3283011 Other La3;lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR23961542 Other La1;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR926164 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR3797046 HR-TB lineage4.9 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR6044819 Sensitive lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR2041725 MDR-TB lineage4.1.2.1 None
ERR4796929 Sensitive lineage4.9 None
SRR1915487 Other La1.2.BCG None
SRR11662690 HR-TB lineage4.9 None
SRR20970016 Other lineage2.2 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
ERR9786076 Sensitive lineage3 None
SRR28119827 Other La3;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR3675477 Sensitive lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR926155 Sensitive lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
ERR4811031 Sensitive lineage4.5 None
ERR387051 Other lineage4.9 None
SRR12142339 HR-TB lineage2.2.1 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR20969708 HR-TB lineage2.2 None
SRR6046046 Other lineage4.9 None