Rv0668 - c.3552G>C


Drug resistance types
50 Sensitive 1 RR-TB 54 HR-TB 6 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 55 Other
lineage Counts
lineage Count
67
lineage4.9 26
lineage3 4
lineage4 30
lineage4.1 2
lineage4.1.1.2 1
lineage4.2.1 1
lineage5.1.4 1
lineage2.2.1 11
lineage4.8 2
lineage2.2 4
lineage4.6.2.2 2
lineage4.3.4.1 2
lineage4.1.2 2
La1.8.1 2
La1.2 2
lineage1.1.2 1
lineage4.5 1
lineage4.3.2.1 1
lineage1.2.2.1 1
lineage1.1.3.1 1
lineage4.8;lineage4.1 2
lineage1.2.1.2 1
lineage7;lineage2.2.1.2 1
lineage4.9;La1 1
spoligotype Counts
spoligotype Count
None 169
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675279 Other None
SRR3675284 HR-TB lineage4.9 None
SRR3675318 Other lineage4.9 None
SRR3675387 Sensitive None
SRR3675456 HR-TB None
SRR3675502 Other None
SRR3675550 Other None
SRR3675522 Other None
SRR3675541 Sensitive lineage4.9 None
SRR3675547 Other lineage4.9 None
SRR3675577 Sensitive lineage4.9 None
SRR3675555 HR-TB None
ERR4816470 Other lineage3 None
ERR4815815 Sensitive lineage4 None
ERR2446566 Other lineage4.1 None
ERR1035162 Other None
ERR2513259 Other lineage3 None
ERR4818252 Other lineage4.1.1.2 None
SRR5341418 Other None
ERR2512770 Other lineage4.2.1 None
ERR2513283 Other lineage5.1.4 None
ERR1023509 Other None
SRR5341296 Sensitive lineage4.9 None
ERR6359082 Other lineage4.9 None
SRR5341323 Sensitive lineage4 None
ERR2660539 Other lineage4.9 None
SRR5341330 HR-TB None
SRR5341345 Sensitive lineage4.9 None
SRR5535933 HR-TB None
SRR6046141 Other lineage4.9 None
SRR6046382 HR-TB lineage2.2.1 None
SRR6045832 HR-TB lineage4.9 None
SRR6045892 Sensitive None
SRR6044819 Sensitive lineage4.9 None
SRR6045053 Other None
SRR6045217 Other lineage4 None
SRR6046046 Other None
SRR6045359 Sensitive lineage4.9 None
SRR6046253 HR-TB lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6511621 HR-TB None
SRR6046397 Other None
SRR6046824 HR-TB None
SRR6046878 HR-TB lineage4 None
ERR4829530 Pre-XDR-TB lineage4.8 None
SRR6046482 HR-TB None
SRR6046492 Other None
ERR4831117 HR-TB None
ERR4831546 HR-TB lineage2.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR294266 HR-TB None
ERR4831638 Sensitive None
SRR6832787 RR-TB lineage2.2.1 None
SRR6832249 Other lineage2.2.1 None
SRR6789624 MDR-TB lineage4.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR7496471 Sensitive None
ERR502889 Other None
ERR3273109 MDR-TB lineage4 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9971114 Other lineage2.2.1 None
ERR1023525 HR-TB lineage4 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR133825 Sensitive lineage4 None
ERR133986 HR-TB None
SRR9970980 Other lineage4.1.2 None
ERR323107 Other lineage4 None
ERR067681 HR-TB None
ERR1063896 Sensitive None
ERR3283014 HR-TB None
ERR3283031 HR-TB None
ERR3283021 HR-TB None
ERR3283028 Other None
ERR3283055 HR-TB None
ERR3283047 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3445504 HR-TB None
ERR3439432 Other None
ERR3797047 HR-TB lineage4 None
ERR3797046 HR-TB None
ERR3797048 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3797060 Other La1.8.1 None
ERR3797087 Sensitive lineage4 None
ERR3797064 Sensitive None
ERR3797063 HR-TB None
ERR3797079 Sensitive lineage4 None
ERR387051 HR-TB None
ERR4024991 Other None
ERR400320 Sensitive lineage4 None
ERR400336 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR400326 Sensitive lineage4 None
ERR4769452 HR-TB None
ERR403298 HR-TB lineage4 None
ERR4188247 HR-TB None
ERR4769450 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4769474 HR-TB lineage4 None
ERR4797264 Sensitive None
ERR4769497 HR-TB La1.2 None
ERR4796929 Sensitive lineage4 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4796254 Sensitive lineage4 None
ERR4797350 Sensitive lineage4.9 None
ERR4797313 HR-TB None
ERR4797474 Other None
ERR4799025 Pre-XDR-TB None
ERR4798099 Other None
ERR4798406 HR-TB None
ERR6358979 Other None
ERR4799378 Sensitive lineage4 None
ERR4811030 Sensitive None
ERR4811493 HR-TB None
ERR4812155 Sensitive None
ERR4799513 HR-TB lineage2.2 None
ERR12015085 Other lineage4.8 None
ERR4811031 Sensitive lineage4.5 None
ERR6866022 Other None
ERR6866410 Sensitive None
ERR6866547 Sensitive lineage4 None
ERR6866639 Other None
ERR736831 HR-TB lineage4.9 None
ERR8975532 HR-TB lineage4.3.2.1 None
ERR736848 HR-TB None
ERR736856 HR-TB lineage4 None
ERR7821210 Sensitive lineage1.2.2.1 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9634265 Sensitive None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9119669 HR-TB None
ERR9786076 Sensitive lineage3 None
SRR10808668 Sensitive lineage2.2.1 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR990545 Other lineage3 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786843 Other None
SRR10808399 Sensitive lineage4 None
SRR10808805 Sensitive None
SRR10809074 Sensitive lineage4 None
SRR1180137 Other lineage2.2.1 None
SRR14801749 Sensitive None
SRR11972367 Sensitive lineage2.2.1 None
SRR12006550 Other lineage1.2.1.2 None
SRR12142339 HR-TB lineage2.2.1 None
SRR13837507 HR-TB lineage4.9 None
SRR14782405 HR-TB None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
SRR19295647 Sensitive lineage4.9 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR20969731 Other lineage2.2.1 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR20632814 Sensitive lineage4 None
SRR23961542 Other lineage4.9;La1 None
SRR22424787 Sensitive lineage4.9 None
SRR20970016 Other lineage2.2 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675473 Sensitive lineage4.9 None
SRR23961549 Other La1.2 None
SRR3675455 Sensitive lineage4 None
SRR3675472 Sensitive lineage4.9 None
SRR3675477 Other lineage4.9 None
SRR3675247 Other lineage4.9 None
ERR158583 HR-TB None
SRR3675229 Other lineage4 None
SRR3675246 Sensitive lineage4 None
SRR3675280 HR-TB lineage4.9 None
SRR3675270 HR-TB None