Rv0668 - c.3552G>C
Drug resistance types
49 Sensitive
3 RR-TB
24 HR-TB
14 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
64 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 68 |
| lineage2.2.1 | 8 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.2.2 | 1 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage3 | 5 |
| La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | 1 |
| lineage4.8 | 3 |
| La1.2;La1.8.1 | 1 |
| lineage4.6.2.2 | 2 |
| La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4 | 2 |
| La3;lineage4.9 | 7 |
| La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.9 | 3 |
| lineage4.3.4.1 | 2 |
| lineage4.9;lineage7 | 4 |
| lineage2.2 | 3 |
| lineage4.6.3;lineage4.9 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.6.4;lineage4.9 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | 3 |
| La3;lineage4 | 1 |
| lineage4.1;lineage4.8 | 2 |
| La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| La3;M.canetti;lineage2;lineage4.2;lineage4.3 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.2;lineage4.8.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 2 |
| 1 | |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.5 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.3.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage1.1.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.2 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2 | 1 |
| La1.2.BCG | 1 |
| lineage5.1.4 | 1 |
| La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 155 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR4811030 | Sensitive | lineage4.9 | None |
| SRR9971114 | Other | lineage2.2.1 | None |
| SRR3675270 | Other | lineage4.9 | None |
| ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None |
| ERR387051 | Other | lineage4.9 | None |
| SRR3675522 | Other | lineage4.9 | None |
| ERR400320 | Sensitive | lineage4.9 | None |
| SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None |
| SRR11662696 | MDR-TB | La1.6;La3;M.canetti;lineage4.2.2 | None |
| ERR5311079 | Other | La1.6;La3;M.canetti;lineage4.2;lineage4.9 | None |
| SRR3675495 | Other | lineage2.1;lineage4.9 | None |
| ERR2513259 | Other | lineage3 | None |
| SRR20969731 | Other | lineage2.2.1 | None |
| ERR926162 | Sensitive | lineage4.9 | None |
| ERR5311103 | RR-TB | La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 | None |
| SRR3675279 | Sensitive | lineage4.9 | None |
| SRR3675446 | RR-TB | lineage4.9 | None |
| ERR4799025 | Other | lineage4.8 | None |
| ERR926160 | Sensitive | lineage4.9 | None |
| SRR10809074 | Sensitive | lineage4.9 | None |
| ERR400345 | Other | lineage4.9 | None |
| SRR6045347 | Other | lineage4.9 | None |
| SRR6046593 | Other | lineage4.9 | None |
| SRR7240033 | Other | La1.2;La1.8.1 | None |
| SRR14801749 | HR-TB | lineage4.9 | None |
| ERR12015085 | Other | lineage4.8 | None |
| ERR4872119 | MDR-TB | lineage4.6.2.2 | None |
| ERR5311091 | Other | La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| ERR4816470 | HR-TB | lineage3 | None |
| ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
| SRR7496471 | Sensitive | lineage4 | None |
| ERR3283011 | Other | La3;lineage4.9 | None |
| SRR6046245 | Other | lineage4.9 | None |
| ERR400336 | Sensitive | lineage4.9 | None |
| ERR4798406 | MDR-TB | La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 | None |
| SRR23961542 | Other | La1;lineage4.9 | None |
| ERR926159 | Sensitive | lineage4.9 | None |
| ERR4799378 | Sensitive | lineage4.9 | None |
| ERR3797064 | Other | La3;lineage4.9 | None |
| SRR14782405 | HR-TB | lineage4.9 | None |
| ERR11465352 | Sensitive | lineage4.3.4.1 | None |
| ERR4831117 | HR-TB | lineage4.9;lineage7 | None |
| SRR3675456 | RR-TB | lineage4.9;lineage7 | None |
| ERR3797046 | HR-TB | lineage4.9 | None |
| ERR4799513 | HR-TB | lineage2.2 | None |
| SRR2010299 | MDR-TB | lineage2.2.1 | None |
| ERR4811493 | HR-TB | lineage4.9 | None |
| SRR20970016 | Other | lineage2.2 | None |
| ERR11252558 | Other | lineage4.6.3;lineage4.9 | None |
| SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
| SRR3675477 | Sensitive | lineage4.9 | None |
| ERR133986 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 | None |
| SRR6046141 | Other | lineage4.9 | None |
| SRR3675586 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| ERR067681 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR12142339 | HR-TB | lineage2.2.1 | None |
| ERR3283028 | Other | La3;lineage4 | None |
| ERR9119669 | HR-TB | lineage4.9 | None |
| SRR6046046 | Other | lineage4.9 | None |
| ERR3797048 | Other | La3;lineage4.9 | None |
| SRR6045548 | Sensitive | lineage4.9 | None |
| SRR3675455 | Sensitive | lineage4.9 | None |
| SRR3675473 | Sensitive | lineage4.9 | None |
| SRR29097004 | Other | lineage3 | None |
| ERR3283031 | Sensitive | La3;lineage4.9 | None |
| ERR9786526 | Other | lineage4.1;lineage4.8 | None |
| ERR2446566 | Other | lineage4.9 | None |
| ERR3283014 | Sensitive | La3;lineage4.9 | None |
| SRR5341330 | Other | lineage4.9 | None |
| SRR6046482 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| ERR9119525 | MDR-TB | lineage4.6.2.2 | None |
| SRR10808805 | Other | La1;lineage4.9 | None |
| ERR1035162 | Other | M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR4829530 | Pre-XDR-TB | lineage4.8 | None |
| ERR990545 | Other | lineage3 | None |
| ERR4812155 | Other | lineage4.9 | None |
| SRR12416842 | HR-TB | lineage4.9 | None |
| SRR3675229 | Sensitive | lineage4.9 | None |
| ERR158583 | MDR-TB | La3;M.canetti;lineage2;lineage4.2;lineage4.3 | None |
| SRR9970978 | Sensitive | La1;lineage4.1.2 | None |
| SRR6832249 | Sensitive | lineage2.2.1 | None |
| ERR4769452 | Other | lineage4.9 | None |
| SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None |
| ERR2041725 | MDR-TB | lineage4.1.2.1 | None |
| ERR6359082 | Other | lineage4.9 | None |
| ERR4796929 | Sensitive | lineage4.9 | None |
| ERR9786843 | Other | None | |
| ERR926156 | Sensitive | lineage4.9 | None |
| ERR9786076 | Sensitive | lineage3 | None |
| SRR19295647 | Sensitive | lineage4.9 | None |
| SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None |
| ERR926165 | Sensitive | lineage4.9 | None |
| SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
| SRR6046382 | Sensitive | lineage2.2.1 | None |
| ERR2693252 | Sensitive | lineage4.9 | None |
| SRR6045217 | Sensitive | lineage4.9 | None |
| ERR3439432 | Other | M.canetti;lineage4.6.4;lineage4.9 | None |
| ERR4797350 | Sensitive | lineage1;lineage4.9 | None |
| ERR926155 | Sensitive | lineage4.9 | None |
| SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None |
| ERR4811031 | Sensitive | lineage4.5 | None |
| ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None |
| ERR4188247 | HR-TB | lineage4.9 | None |
| SRR9970980 | HR-TB | lineage4.1.2 | None |
| SRR6045053 | Other | lineage4 | None |
| SRR20969708 | HR-TB | lineage2.2 | None |
| SRR6046577 | Other | lineage4.6.3;lineage4.9 | None |
| SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
| ERR736856 | Sensitive | lineage4.9 | None |
| SRR14782054 | Other | lineage4.9 | None |
| ERR926158 | Sensitive | lineage4.9 | None |
| ERR4818252 | Sensitive | lineage4.1.1.2 | None |
| ERR4769450 | Other | lineage4.9 | None |
| ERR1063846 | HR-TB | lineage4.9 | None |
| ERR926161 | Sensitive | lineage4.9 | None |
| ERR400326 | Other | lineage4.9 | None |
| ERR2041726 | MDR-TB | lineage4.1.2.1 | None |
| SRR6511621 | Sensitive | lineage4.9 | None |
| ERR926163 | Other | lineage4.9 | None |
| ERR3283021 | HR-TB | lineage4.9 | None |
| SRR3675387 | Other | lineage4.9 | None |
| ERR926154 | Sensitive | lineage4.9 | None |
| ERR971389 | Sensitive | lineage4.9 | None |
| ERR8975532 | HR-TB | lineage4.3.2.1 | None |
| ERR1023509 | Other | lineage4.9 | None |
| ERR926164 | Other | lineage4.9 | None |
| ERR8479578 | Sensitive | lineage1.1.3.1 | None |
| SRR3675247 | Other | lineage4.9 | None |
| ERR3797047 | MDR-TB | lineage4.9 | None |
| SRR6046824 | MDR-TB | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR28119827 | Other | La3;lineage4.9 | None |
| ERR4797193 | HR-TB | lineage1.1.2 | None |
| ERR2660539 | Other | lineage4.9 | None |
| ERR11465353 | Sensitive | lineage4.3.4.1 | None |
| SRR6044819 | Sensitive | lineage4.9 | None |
| SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| SRR23961549 | Other | La1.2 | None |
| SRR5341418 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 | None |
| ERR3283057 | Sensitive | La3;lineage4.9 | None |
| ERR403298 | MDR-TB | M.canetti;lineage4.2 | None |
| SRR1915487 | Other | La1.2.BCG | None |
| ERR2513283 | Sensitive | lineage5.1.4 | None |
| SRR11662690 | HR-TB | lineage4.9 | None |
| SRR3675390 | Other | La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 | None |
| SRR20632814 | Sensitive | lineage4.9 | None |
| ERR4769497 | Other | La1;lineage4.9 | None |
| ERR4797313 | Sensitive | lineage2.2.1 | None |
| ERR502889 | Other | La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 | None |
| ERR9786525 | Other | lineage4.1;lineage4.8 | None |
| SRR12006550 | Sensitive | lineage1.2.1.2 | None |
| SRR6046878 | Other | lineage4.9 | None |
| ERR926157 | Sensitive | lineage4.9 | None |
| SRR10808668 | Sensitive | lineage2.2.1 | None |
| ERR3797029 | Other | lineage4.9 | None |
| SRR6045359 | Sensitive | lineage4.9 | None |
