Rv0667 - c.1452G>A
Drug resistance types
92 Sensitive
33 RR-TB
85 HR-TB
15 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
62 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2 | 8 |
| 59 | |
| lineage4.3.4 | 2 |
| lineage4.9 | 98 |
| lineage4 | 74 |
| lineage4.3 | 1 |
| lineage2.1 | 1 |
| lineage3.1 | 1 |
| lineage4.8 | 2 |
| lineage4.1.2.1 | 8 |
| lineage3 | 4 |
| lineage2.2.1 | 13 |
| lineage5.1.4 | 1 |
| lineage4.2.1 | 3 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.1.2 | 1 |
| lineage4.9.1 | 1 |
| lineage4.1.1.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage5.1.2 | 1 |
| lineage4.9;La1.3 | 2 |
| La1.3 | 1 |
| La1.2 | 1 |
| lineage4.5 | 2 |
| lineage2.2.1.2 | 3 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.6 | 1 |
| lineage4.7 | 1 |
| La3 | 1 |
| lineage4.3.4.1 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 300 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3601585 | Pre-XDR-TB | lineage2.2 | None | SRR3675488 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2 | None | ERR181744 | HR-TB | None | ERR4815471 | Other | lineage4.9 | None | SRR3675501 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR3675222 | Other | None | ERR3275450 | Other | lineage4 | None | SRR3675387 | Sensitive | None | ERR1750908 | Sensitive | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675265 | Other | lineage4 | None | SRR3675270 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | SRR3675247 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675292 | Sensitive | lineage4 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675547 | Other | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR212033 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR212123 | Other | None | ERR212034 | HR-TB | None | ERR2229392 | Sensitive | lineage4.8 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR2229198 | MDR-TB | lineage4.8 | None | ERR216965 | HR-TB | lineage4.9 | None | ERR4817204 | RR-TB | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4818536 | Other | lineage4.9 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818624 | Other | lineage4.3.4.2.1 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341396 | Other | lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341456 | Other | None | SRR5341408 | Sensitive | lineage3 | None | ERR4819462 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341315 | Sensitive | None | ERR2446382 | Other | lineage4 | None | SRR5341313 | HR-TB | None | ERR6359082 | Other | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820043 | Sensitive | lineage4.1.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | SRR6045503 | HR-TB | None | SRR5535933 | HR-TB | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6045664 | Other | lineage4.2.1 | None | ERR4821143 | RR-TB | lineage4.9 | None | SRR6045519 | HR-TB | None | SRR6045053 | Other | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6046299 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4829196 | Other | lineage4.1.2 | None | ERR4830353 | Other | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046802 | Other | lineage4 | None | SRR6046492 | Other | None | SRR6046604 | Sensitive | lineage2.2.1 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046897 | Sensitive | lineage4 | None | ERR11466062 | Sensitive | lineage4.9.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR4831117 | HR-TB | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4818958 | Sensitive | lineage4.1.1.1 | gb | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831638 | Sensitive | None | ERR502943 | HR-TB | None | SRR8217918 | HR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971080 | RR-TB | lineage2.2.1 | None | ERR323045 | HR-TB | None | ERR323057 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR1063862 | HR-TB | None | ERR036207 | Other | lineage4.9 | None | ERR1034634 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR3445504 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283041 | Other | lineage4.9 | None | ERR3283055 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR373945 | HR-TB | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR400326 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR3797086 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR473332 | Other | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4796577 | MDR-TB | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769514 | Other | La1.3 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4797313 | HR-TB | None | ERR4798431 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4812155 | Sensitive | None | ERR4811493 | HR-TB | None | ERR4811030 | Sensitive | None | ERR6359066 | HR-TB | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR702404 | HR-TB | None | ERR736837 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4 | None | ERR9786076 | Sensitive | lineage3 | None | ERR752229 | Other | lineage4.5 | None | ERR9119669 | HR-TB | None | ERR7821163 | Other | lineage2.2.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR10993951 | RR-TB | La1.6 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9896144 | Other | lineage3 | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1169306 | Other | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1173310 | MDR-TB | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR13583478 | HR-TB | lineage4.3.4.1 | None | SRR13861218 | RR-TB | lineage4.9 | None | SRR13861197 | RR-TB | lineage4.9 | None | SRR13861216 | RR-TB | lineage4.9 | None | SRR13861222 | RR-TB | lineage4.9 | None | SRR13861344 | RR-TB | lineage4.9 | None | SRR13861277 | RR-TB | lineage4.9 | None | SRR13861341 | RR-TB | lineage4.9 | None | SRR13861282 | RR-TB | lineage4.9 | None | SRR13861321 | RR-TB | lineage4.9 | None | SRR13861563 | RR-TB | lineage4.9 | None | SRR13861439 | RR-TB | lineage4.9 | None | SRR13861481 | RR-TB | lineage4.9 | None | SRR13861501 | RR-TB | lineage4.9 | None | SRR13861500 | RR-TB | lineage4.9 | None | SRR13861506 | RR-TB | lineage4.9 | None | SRR13861631 | RR-TB | lineage4.9 | None | SRR13861561 | RR-TB | lineage4.9 | None | SRR13861695 | RR-TB | lineage4.9 | None | SRR13861632 | MDR-TB | lineage4.9 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR13861729 | RR-TB | lineage4.9 | None | SRR14334195 | Pre-XDR-TB | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR13861736 | RR-TB | lineage4.9 | None | SRR16156804 | RR-TB | lineage4.9 | None | SRR16156697 | MDR-TB | lineage2.2.1 | None | SRR16156832 | RR-TB | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None |
|---|
