Rv0006 - c.-287G>A
Drug resistance types
18 Sensitive
1 RR-TB
56 HR-TB
9 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
40 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 19 |
| 60 | |
| lineage4.9 | 21 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.3 | 4 |
| lineage4.4.1.1 | 1 |
| lineage2.2.1 | 6 |
| lineage3.1 | 2 |
| lineage2 | 3 |
| lineage2.1 | 2 |
| lineage4.9;La3 | 1 |
| lineage4.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.8 | 1 |
| lineage4.8;La3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.1.3 | 1 |
| lineage2.2 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 130 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6359066 | HR-TB | lineage4 | None | ERR6358951 | HR-TB | lineage4 | None | SRR1172234 | Other | None | ERR6866807 | HR-TB | lineage4 | None | SRR1169194 | Other | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736835 | HR-TB | None | ERR736874 | HR-TB | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR9119669 | HR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172857 | MDR-TB | None | SRR1172951 | Other | None | SRR1173118 | Other | None | SRR1173166 | Other | lineage4.9 | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173330 | Pre-XDR-TB | lineage4 | None | SRR1173400 | Other | None | SRR1173484 | Other | lineage4 | None | SRR1173629 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1175074 | MDR-TB | None | SRR1173788 | Other | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184294 | HR-TB | None | SRR1184388 | Other | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196546 | HR-TB | None | SRR1196494 | MDR-TB | None | SRR15368973 | Other | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR1710057 | Other | lineage2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR19304036 | HR-TB | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR20969677 | HR-TB | lineage2 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR176793 | Other | lineage4.1.1 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3416776 | Other | lineage2.1 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | SRR3675279 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR181887 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675456 | HR-TB | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675542 | Other | lineage4.9 | None | ERR4817060 | RR-TB | None | ERR2027263 | Other | lineage4 | None | SRR3675555 | HR-TB | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4818394 | Other | lineage4.9 | None | SRR3742665 | HR-TB | None | ERR4817735 | Other | lineage4.8 | None | ERR4817893 | Other | lineage4.8;La3 | None | SRR6044790 | HR-TB | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341302 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | ERR2513470 | Other | lineage4.2.2.2 | None | SRR5341323 | Sensitive | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6046397 | Other | None | SRR6046245 | Other | lineage4.9 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6046644 | HR-TB | None | ERR502943 | HR-TB | None | ERR4831117 | HR-TB | None | SRR6789626 | Other | None | ERR4831638 | Sensitive | None | ERR502908 | HR-TB | lineage2.2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR8217918 | HR-TB | None | ERR323045 | HR-TB | None | ERR11465025 | Other | lineage4.1.1.3 | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063855 | Other | lineage4 | None | ERR1063859 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445501 | HR-TB | None | ERR3445503 | HR-TB | None | ERR387051 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4407463 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769521 | HR-TB | None | ERR4769442 | HR-TB | lineage4 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797313 | HR-TB | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR4811493 | HR-TB | None |
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