Rv0006 - c.-287G>A
Drug resistance types
10 Sensitive
2 RR-TB
22 HR-TB
9 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| La3 | 2 |
| lineage2.1 | 3 |
| lineage4.3.4.2.1 | 1 |
| 9 | |
| lineage4.9 | 23 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage4.9 | 2 |
| lineage4.9;lineage7 | 4 |
| lineage2.1;lineage4.9 | 6 |
| lineage4 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.9;lineage9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1 | 6 |
| lineage2.1;lineage4.9;lineage6.3 | 2 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.9;lineage6.3 | 4 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.3.3 | 1 |
| lineage4.5 | 1 |
| La3;lineage2 | 1 |
| La2;lineage4.9 | 1 |
| La3;lineage2.2.1 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.1.1.1 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage3.1 | 1 |
| lineage4.1.2.1 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.8 | 1 |
| lineage4.8 | 1 |
| La2;lineage2.2 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 93 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| SRR1172817 | Other | La3 | None |
| ERR4797054 | Pre-XDR-TB | lineage2.1 | None |
| ERR176549 | Other | lineage4.3.4.2.1 | None |
| SRR1184372 | MDR-TB | None | |
| SRR1196583 | Other | lineage4.9 | None |
| ERR4811030 | Sensitive | lineage4.9 | None |
| ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None |
| SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None |
| SRR26399973 | Other | La3;lineage4.9 | None |
| SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
| SRR6044790 | Other | lineage2.1;lineage4.9 | None |
| SRR5341345 | Sensitive | lineage4.9 | None |
| SRR3675216 | Other | lineage2.1;lineage4.9 | None |
| ERR2027263 | Other | lineage4 | None |
| ERR1063855 | Other | lineage4.9 | None |
| ERR4769521 | RR-TB | lineage4.9 | None |
| ERR2513470 | Other | lineage4.2.2.2 | None |
| SRR6789626 | Other | None | |
| SRR6046720 | HR-TB | lineage4.9;lineage9 | None |
| SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None |
| SRR6458423 | HR-TB | lineage2.2.1 | None |
| SRR29017461 | Other | La3;lineage4.9 | None |
| ERR4811311 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None |
| SRR1165699 | Other | lineage4.9 | None |
| ERR13265748 | Other | lineage4.9;lineage6.3 | None |
| ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| SRR1173400 | Other | lineage4.9 | None |
| ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None |
| ERR323056 | HR-TB | lineage4.4.1.2 | None |
| SRR12708416 | Sensitive | None | |
| ERR4811493 | HR-TB | lineage4.9 | None |
| SRR1184381 | MDR-TB | None | |
| SRR6789621 | Other | lineage4.9 | None |
| ERR4817060 | Other | None | |
| ERR502908 | HR-TB | lineage2.2.1 | None |
| SRR3675539 | HR-TB | lineage4.9;lineage7 | None |
| ERR13265528 | Other | lineage4.9;lineage6.3 | None |
| SRR1196566 | Other | lineage4.9 | None |
| SRR21732980 | Other | lineage4.3.3 | None |
| SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4811031 | Sensitive | lineage4.5 | None |
| SRR28119717 | Other | lineage4.9;lineage6.3 | None |
| SRR20969677 | HR-TB | La3;lineage2 | None |
| SRR1710057 | Other | lineage2.1 | None |
| SRR3675495 | Other | lineage2.1;lineage4.9 | None |
| SRR1196494 | MDR-TB | None | |
| ERR1063857 | MDR-TB | La2;lineage4.9 | None |
| SRR29055629 | MDR-TB | La3;lineage2.2.1 | None |
| ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None |
| SRR20970043 | MDR-TB | lineage2.2.1 | None |
| ERR400336 | Sensitive | lineage4.9 | None |
| ERR176793 | Other | lineage4.1.1.1 | None |
| SRR1172728 | RR-TB | La3 | None |
| ERR4831117 | HR-TB | lineage4.9;lineage7 | None |
| SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None |
| SRR1184346 | HR-TB | lineage3.1 | None |
| SRR29016780 | Other | lineage4.9 | None |
| SRR1184294 | Other | lineage4.9 | None |
| SRR7131023 | Other | lineage4.1.2.1 | None |
| ERR4797313 | Sensitive | lineage2.2.1 | None |
| ERR3445502 | Sensitive | lineage4.9;lineage7 | None |
| ERR736835 | HR-TB | La1.7;M.canetti;lineage4.9 | None |
| SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None |
| SRR1165667 | Other | lineage4.9;lineage6.3 | None |
| SRR1173363 | Other | None | |
| SRR6046382 | Sensitive | lineage2.2.1 | None |
| ERR4407463 | HR-TB | None | |
| SRR1172951 | Other | lineage4.9 | None |
| SRR1173778 | Other | lineage4.9 | None |
| SRR1196768 | MDR-TB | None | |
| SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None |
| ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None |
| ERR4769439 | HR-TB | lineage4.9 | None |
| SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None |
| ERR4817893 | Other | La3;lineage4.8 | None |
| ERR387051 | Other | lineage4.9 | None |
| SRR3675580 | Sensitive | lineage4.9 | None |
| SRR1184388 | Other | lineage2.1;lineage4.9 | None |
| ERR736874 | Other | La3;lineage2.1;lineage4.9 | None |
| SRR1173629 | Other | lineage2.1;lineage4.9 | None |
| ERR4817735 | Other | lineage4.8 | None |
| ERR1063839 | MDR-TB | La2;lineage2.2 | None |
| ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None |
| SRR1173355 | Other | lineage4.9 | None |
| SRR3675522 | Other | lineage4.9 | None |
| SRR3416776 | Other | lineage2.1 | None |
| SRR3675455 | Sensitive | lineage4.9 | None |
| SRR1184312 | Other | lineage2.2.1 | None |
| SRR1196546 | Other | lineage4.9 | None |
| ERR6359074 | HR-TB | lineage4.9 | None |
| SRR1184380 | Other | lineage2.1;lineage4.9 | None |
| ERR11465025 | Other | lineage4.1.1.3 | None |
