lineage | Count |
---|---|
21 | |
lineage4 | 16 |
lineage4.9 | 30 |
lineage1.1.3.1 | 1 |
lineage2.2.1 | 5 |
lineage4.5 | 1 |
lineage4.1.2 | 1 |
La3 | 1 |
lineage1.2.1.2 | 1 |
lineage2.2 | 1 |
lineage2.2.1.1 | 1 |
lineage2 | 1 |
lineage4.1 | 2 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
lineage4.3 | 1 |
lineage4.8 | 1 |
lineage3 | 1 |
lineage5.1.4 | 1 |
lineage4.1.2.1 | 1 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 89 |
ID | Drug resistance | Lineage | Country iso2 | ERR4769521 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR400326 | Sensitive | lineage4 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR6358979 | Other | None | SRR16088189 | Sensitive | lineage4.1.2 | None | SRR1167384 | Other | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1169249 | Other | La3 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | ERR176568 | Other | lineage4.3 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | ERR176643 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | SRR3675456 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675537 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | ERR4816151 | Other | lineage4.8 | None | ERR2514552 | Sensitive | lineage3 | None | SRR3675555 | HR-TB | None | SRR3675577 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR6045555 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | ERR2517475 | Other | lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR6046133 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6045158 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046245 | Other | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR4831638 | Sensitive | None | SRR8217918 | HR-TB | None | ERR502943 | HR-TB | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR363456 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None |
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