Rv0006 - c.-236G>T
Drug resistance types
28 Sensitive
0 RR-TB
8 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
12 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 25 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| lineage2.2.1 | 5 |
| lineage4.9;lineage7 | 2 |
| lineage4.1.2 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage3 | 1 |
| lineage4.1.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| 1 | |
| lineage1.1.1;lineage4 | 1 |
| lineage1.2.1.2 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage2.1;lineage4.9 | 1 |
| lineage4.8 | 1 |
| lineage5.1.4 | 1 |
| lineage4.5 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 54 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6045219 | HR-TB | lineage4.9 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR16088189 | Sensitive | lineage4.1.2 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | SRR23961558 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR2026698 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR387051 | Other | lineage4.9 | None | ERR2026697 | HR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR6046245 | Other | lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | SRR8217918 | HR-TB | lineage4.9 | None | SRR6046594 | Sensitive | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR6046485 | Other | lineage4.9 | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | SRR6045555 | Other | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR6046133 | HR-TB | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR6045371 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | ERR4816151 | Sensitive | lineage4.8 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR400320 | Sensitive | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None |
|---|
