Rv0005 - p.Asp657Glu
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
72 Sensitive
0 RR-TB
31 HR-TB
2 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 109 |
| lineage4.5 | 1 |
| lineage4.3.4 | 1 |
| lineage4 | 5 |
| La3;lineage4.9 | 6 |
| La1.7;lineage4.9 | 4 |
| La1.7 | 1 |
| lineage2.2.1 | 6 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.1.2.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.1.2 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| lineage4.1;lineage4.9 | 1 |
| 1 | |
| lineage3;lineage4 | 1 |
| lineage4.8 | 1 |
| lineage4.3.2.1 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| La1;lineage4.9 | 1 |
| lineage3 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage1.1.2 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 157 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR176778 | HR-TB | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR4815471 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR369158 | Other | lineage4.9 | None | ERR369151 | Other | lineage4.9 | None | ERR363498 | Sensitive | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR736856 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR363437 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR14801749 | HR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4819933 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR212138 | HR-TB | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR363502 | Other | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | ERR363447 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4797264 | Sensitive | lineage4.9 | None | SRR1180996 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR5311097 | Sensitive | lineage4.2;lineage4.6.3;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR502511 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR4829940 | Pre-XDR-TB | lineage3;lineage4 | pk | SRR3675522 | Other | lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR6045053 | Other | lineage4 | None | SRR6046046 | Other | lineage4.9 | None | ERR702405 | Sensitive | lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4816964 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR6046593 | Other | lineage4.9 | None | SRR5341366 | Sensitive | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | ERR363474 | Sensitive | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR13265833 | Other | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR3283011 | Other | La3;lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR5341467 | Other | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR323085 | Sensitive | lineage4.9 | None | ERR349296 | Sensitive | lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | SRR28351339 | MDR-TB | lineage4 | None |
|---|
