Rv0667 - c.2061C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
37 Sensitive
4 RR-TB
23 HR-TB
3 MDR-TB
1 Pre-XDR-TB
2 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9;lineage9 | 1 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.9 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.9 | 47 |
| lineage4 | 2 |
| lineage4.9;lineage6.3 | 1 |
| lineage2.2.1 | 4 |
| lineage1.1.3.1 | 1 |
| lineage4.8 | 3 |
| M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage4.5 | 1 |
| lineage2.2 | 1 |
| lineage2.1;lineage4.9 | 1 |
| 2 | |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.9;lineage7 | 3 |
| M.canetti;lineage2.2 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4.3 | 1 |
| La1.2 | 1 |
| La1.7;lineage4.9 | 1 |
| M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| M.canetti;lineage1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 92 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR3675280 | RR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR5341453 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR926164 | Other | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR9970979 | Sensitive | lineage4.8 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR473314 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR1183049 | RR-TB | lineage2.2 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR12006550 | Sensitive | None | ERR926159 | Sensitive | lineage4.9 | None | ERR4799378 | Sensitive | lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR6079962 | HR-TB | lineage2.2.1.1 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | SRR5341299 | HR-TB | lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR3797029 | Other | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR9786525 | Other | lineage4 | None | ERR926163 | Other | lineage4.9 | None | ERR867542 | HR-TB | lineage4.3 | None | SRR23961542 | Other | La1;lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR23961549 | Other | La1.2 | None | SRR3675585 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR9786843 | Other | None | ERR6359045 | Other | M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR387051 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR3675522 | Other | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | ERR4797184 | Sensitive | lineage4.9 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR9786444 | Sensitive | lineage4.8 | None |
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