Rv0006 - c.546G>C


Drug resistance types
83 Sensitive 3 RR-TB 35 HR-TB 11 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 63 Other
lineage Counts
lineage Count
lineage4.9 114
lineage4.1.1.3 2
lineage4.1.2.1 1
lineage5.2 2
La1;lineage4.9 2
lineage1.1.3.1 1
M.canetti;lineage4.9 2
La1.7;lineage4.9 5
lineage4.8;lineage4.9 2
lineage3 2
La1.7;M.canetti;lineage4.9 2
2
lineage2.2.1 9
lineage4.6.1.1 2
La1.7 2
lineage4.3.3 1
La1.7.1 1
lineage4.1.2 1
La3;M.canetti;lineage4.9 1
La3;lineage4.9 7
La1.2;La1.8.1 1
La1.7;lineage4.3.4.1 1
lineage4 4
M.canetti;lineage1 1
lineage4.3.2.1 2
lineage2.1;lineage4.3.2;lineage4.9 1
La1;lineage4.1.2 1
lineage4.2;lineage4.9 2
lineage4.6.2.2 1
lineage4.6.3;lineage4.9 2
lineage1.2.1.1 1
lineage4.3.4.1 1
lineage4.2.1 1
lineage4.3.4.2.1 1
La1.7.1;La1.7.X-unk4;lineage7 1
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.9;lineage7 1
lineage4.1.1.3;lineage4.9 1
lineage2.1 1
La1.8.1 1
lineage2.2.1.2;lineage7 1
La1.7;lineage4.9;lineage6 1
lineage4.1;lineage4.9 1
lineage4.5 1
M.canetti;lineage4.9;lineage9 1
La3;lineage4 1
lineage1.1.2 1
lineage4.6.3;lineage4.9;lineage6.3 1
La3;lineage4.3.4 1
La1;lineage2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 198
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR363499 Sensitive lineage4.9 None
ERR11466044 Other lineage4.1.1.3 None
SRR29096530 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR3675387 Other lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
SRR3675229 Sensitive lineage4.9 None
ERR369160 Sensitive lineage4.9 None
ERR363445 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR363502 Other lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR6045519 MDR-TB M.canetti;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR736834 Sensitive lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
ERR363456 Sensitive lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR212001 HR-TB None
ERR4797313 Sensitive lineage2.2.1 None
ERR4797474 Sensitive lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
SRR3675222 Other La1.7 None
ERR3797029 Other lineage4.9 None
ERR363453 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
SRR3675385 Other La1.7;lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR369163 Sensitive lineage4.9 None
ERR369158 Other lineage4.9 None
ERR9119669 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR13285068 Sensitive lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR4830353 Other La1.7 None
ERR4798099 Other lineage4.9 None
SRR6045526 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR2446566 Other lineage4.9 None
ERR349265 Other lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
SRR14801749 HR-TB lineage4.9 None
ERR11465802 Other La1.7;lineage4.3.4.1 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4178226 Sensitive lineage4 None
ERR4797184 Sensitive lineage4.9 None
ERR161037 Other lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR5341461 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR6044876 Sensitive lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR6789624 HR-TB lineage4.1.1.3 None
ERR108471 HR-TB lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR13285191 Sensitive lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR349266 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR1180996 Sensitive lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR369159 Sensitive lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR13285192 Sensitive lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR137286 Other lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
ERR1063896 Sensitive None
ERR363498 Sensitive lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
SRR3675461 RR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
SRR10315567 HR-TB lineage2.2.1 None
ERR11465801 Other lineage4.3.4.1 None
ERR3283011 Other La3;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR751326 Other lineage4.9 None
SRR3675260 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR971389 Sensitive lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR4812155 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR363447 Other lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR349296 Sensitive lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR349264 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
ERR4831618 MDR-TB lineage2.1 None
ERR363500 Sensitive lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR323062 Sensitive lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR323066 Sensitive lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR3283040 HR-TB lineage4.9 None
ERR369162 Other lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
SRR28351347 Other lineage3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR3283028 Other La3;lineage4 None
ERR502511 Sensitive lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
ERR4188247 HR-TB lineage4.9 None
SRR5341310 Other lineage1.1.2 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR323107 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR363421 Sensitive lineage4.9 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR5341345 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR363449 Sensitive lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
ERR349299 Other lineage4.9 None
ERR400326 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR3283021 HR-TB lineage4.9 None