lineage | Count |
---|---|
La1.8.1 | 2 |
9 | |
lineage4.3.4.2.1 | 4 |
lineage4.9 | 42 |
lineage3 | 11 |
lineage4 | 23 |
lineage4.9;lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2 | 1 |
lineage2.2 | 1 |
lineage2.2.1 | 4 |
lineage4.4 | 1 |
lineage4.1 | 1 |
lineage4.3.4.2 | 1 |
lineage4.2.1 | 1 |
lineage5.1.4 | 1 |
lineage4.8 | 2 |
lineage1.1.1 | 1 |
lineage4.1.2.1 | 3 |
lineage4.6.1.1 | 2 |
La1.2 | 1 |
lineage4.5 | 1 |
lineage4.1.1.3 | 1 |
lineage4.6.2.2 | 1 |
lineage4.4.1.1;lineage4.1.2.1 | 1 |
spoligotype | Count |
---|---|
None | 117 |
ID | Drug resistance | Lineage | Country iso2 | SRR11462861 | Other | La1.8.1 | None | SRR1140736 | RR-TB | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1173170 | Other | lineage4.9 | None | SRR1175474 | HR-TB | lineage4.9 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173740 | Other | None | SRR1173770 | Other | lineage4.9 | None | SRR1175473 | Other | lineage4.9 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1181214 | Other | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR16157123 | Other | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR15315871 | Sensitive | lineage4.9 | None | SRR13837710 | Sensitive | lineage4.9 | None | SRR16627752 | RR-TB | lineage4.4 | None | SRR3675455 | Sensitive | lineage4 | None | SRR19303931 | Other | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | ERR192070 | Other | None | SRR3675522 | Other | None | SRR3675318 | Other | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4817069 | RR-TB | None | ERR4815815 | Sensitive | lineage4 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4816470 | Other | lineage3 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2513259 | Other | lineage3 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5341396 | Other | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4 | None | ERR2446382 | Other | lineage4 | None | ERR4821276 | Other | lineage3 | None | ERR4820030 | Other | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | SRR6044952 | RR-TB | lineage4.9 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR7535079 | Sensitive | lineage4.6.1.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6896576 | Other | lineage2.2.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR7535053 | Sensitive | lineage3 | None | SRR7535074 | Sensitive | lineage3 | None | SRR7535081 | Sensitive | lineage4.6.1.1 | None | SRR7535082 | Sensitive | lineage4 | None | ERR3468659 | Other | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR3439441 | Other | La1.8.1 | None | ERR3797081 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR400326 | Sensitive | lineage4 | None | ERR4769418 | Other | La1.2 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797313 | HR-TB | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4812155 | Sensitive | None | ERR4798823 | HR-TB | lineage4 | None | ERR4811030 | Sensitive | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR9786164 | RR-TB | lineage4.1.1.3 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049672 | Other | lineage3 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None |
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