Rv0668 - c.3576A>C
Drug resistance types
49 Sensitive
0 RR-TB
28 HR-TB
5 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
25 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 62 |
| lineage1.1.3.1 | 1 |
| lineage1.1.2 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.1.2 | 1 |
| lineage4.8 | 2 |
| La1;lineage4.9 | 2 |
| La1.7;lineage4.9 | 1 |
| lineage3 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage2.2.1 | 7 |
| lineage5.1.4 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| lineage1.2.1.2 | 1 |
| lineage1;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| 2 | |
| lineage2.2.1;lineage4 | 1 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.3.4.1 | 1 |
| lineage3.1.2.1 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage4 | 5 |
| lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
| La3;lineage4.9 | 1 |
| lineage2.1 | 1 |
| lineage2.2.1.2;lineage7 | 1 |
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.5 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.1.1.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 108 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341453 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR3675547 | Sensitive | lineage4.9 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR4819422 | HR-TB | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4815441 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4817731 | HR-TB | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR4816656 | Other | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR11252664 | Other | lineage2.2.1 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR12006550 | Sensitive | lineage1.2.1.2 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR4819241 | Other | lineage4.9 | None | ERR4818929 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR1063896 | Sensitive | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR4798099 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR12708416 | Sensitive | None | ERR2517475 | Other | lineage4 | None | ERR349264 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4798823 | HR-TB | lineage4 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR3675522 | Other | lineage4.9 | None | ERR4820773 | HR-TB | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR11489020 | MDR-TB | lineage2.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR400326 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR11466044 | Other | lineage4.1.1.3 | None | ERR108471 | HR-TB | lineage4.9 | None | ERR4819877 | HR-TB | lineage4.9 | None | ERR4816478 | HR-TB | lineage4 | None | SRR3675387 | Other | lineage4.9 | None |
|---|
