lineage | Count |
---|---|
lineage4.4.1.1 | 1 |
lineage4.1.2.1 | 6 |
lineage4.5 | 2 |
lineage2.2.1 | 4 |
48 | |
lineage4.1 | 1 |
lineage4 | 8 |
lineage4.9 | 9 |
lineage3;lineage2.1 | 1 |
lineage4.1.1 | 1 |
lineage4;lineage1.1.2 | 1 |
lineage4.1.1.3 | 1 |
lineage4.3.4.2.1 | 2 |
lineage4.1.1.2 | 1 |
lineage3 | 1 |
lineage1.1 | 1 |
lineage3.1 | 2 |
La1.8.1 | 1 |
lineage4;lineage3.1 | 1 |
lineage4.3.3 | 2 |
lineage4.1.2.1.1 | 1 |
lineage4.3.2 | 1 |
spoligotype | Count |
---|---|
None | 96 |
ID | Drug resistance | Lineage | Country iso2 | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1163221 | HR-TB | lineage4.1.2.1 | None | SRR1162740 | Other | lineage4.1.2.1 | None | SRR1162864 | HR-TB | lineage4.1.2.1 | None | SRR13423544 | Other | lineage4.5 | None | SRR5709967 | MDR-TB | lineage2.2.1 | None | SRR1640750 | HR-TB | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | SRR3675247 | Other | lineage4.9 | None | SRR3675482 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | SRR3675229 | Other | lineage4 | None | ERR161033 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | SRR3675279 | Other | None | ERR2229143 | Other | lineage4.1.1 | None | SRR3675387 | Sensitive | None | SRR3675522 | Other | None | SRR3675547 | Other | lineage4.9 | None | SRR3675558 | HR-TB | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR3275196 | Other | lineage2.2.1 | nl | SRR3675383 | HR-TB | None | SRR3675545 | HR-TB | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | ERR216978 | Sensitive | lineage4.3.4.2.1 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR278594 | HR-TB | None | ERR4821053 | Other | lineage3 | None | ERR2693239 | HR-TB | None | ERR2446563 | Other | lineage2.2.1 | nl | SRR6045952 | HR-TB | None | SRR6325442 | HR-TB | None | SRR6046245 | Other | lineage4.9 | None | SRR6046514 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6325448 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR4831638 | Sensitive | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | ERR3077978 | Other | lineage1.1 | None | ERR294248 | HR-TB | None | ERR5311099 | HR-TB | None | ERR323034 | HR-TB | lineage3.1 | None | ERR323036 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323041 | HR-TB | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR5311090 | HR-TB | None | ERR323038 | HR-TB | None | ERR323063 | HR-TB | None | ERR323045 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR323055 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR1034634 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3445503 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283017 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR3797082 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR400345 | Other | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4811030 | Sensitive | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188350 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4797313 | HR-TB | None | ERR6358979 | Other | None | ERR4812155 | Sensitive | None | ERR5908228 | Other | lineage4.3.3 | None | ERR5917710 | Other | lineage4.1.2.1 | None | ERR6358837 | HR-TB | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR736839 | Other | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None |
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