Rv3596c - c.942C>T
Drug resistance types
57 Sensitive
0 RR-TB
35 HR-TB
8 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
27 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 33 |
| lineage1.2.2.2 | 2 |
| lineage4.2.1 | 2 |
| lineage5.1.4 | 1 |
| 37 | |
| lineage3 | 1 |
| lineage4.9 | 35 |
| lineage4.1.2.1 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.1 | 2 |
| lineage4.1.2 | 1 |
| lineage2.2.1 | 5 |
| lineage4.4.1.2 | 1 |
| lineage4.5 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.4.2 | 1 |
| lineage2.1 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 128 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR5341396 | Other | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819255 | HR-TB | lineage1.2.2.2 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341418 | Other | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341323 | Sensitive | lineage4 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | SRR5341456 | Other | None | ERR4821655 | Sensitive | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6045892 | Sensitive | None | ERR2693227 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | SRR6046210 | Other | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046839 | Other | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046460 | HR-TB | None | SRR6046482 | HR-TB | None | SRR6046644 | HR-TB | None | ERR4816306 | HR-TB | lineage1.2.2.2 | gb | SRR6046824 | HR-TB | None | ERR4831638 | Sensitive | None | SRR6789624 | MDR-TB | lineage4.1 | None | SRR6982196 | Sensitive | None | ERR502510 | Sensitive | lineage4 | None | ERR502889 | Other | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR502943 | HR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | ERR067699 | HR-TB | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR067681 | HR-TB | None | ERR400336 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR133986 | HR-TB | None | ERR3283021 | HR-TB | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR400320 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3439432 | Other | None | ERR3445504 | HR-TB | None | ERR363456 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR4797474 | Other | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4188247 | HR-TB | None | ERR4769442 | HR-TB | lineage4 | None | ERR4797313 | HR-TB | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR736848 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR4798406 | HR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR5864140 | MDR-TB | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10808399 | Sensitive | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR10808805 | Sensitive | None | SRR20969542 | Other | lineage4.4.2 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR14801749 | Sensitive | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | SRR13837507 | HR-TB | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR158583 | HR-TB | None | SRR3675229 | Other | lineage4 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675249 | Sensitive | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675283 | Sensitive | lineage4.9 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | SRR3675318 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675502 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675542 | Other | lineage4.9 | None | SRR3675571 | HR-TB | None | SRR3675550 | Other | None | SRR3675577 | Sensitive | lineage4.9 | None |
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