Rv0006 - c.1980C>G
Drug resistance types
26 Sensitive
2 RR-TB
75 HR-TB
4 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
29 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1 | 2 |
| lineage4.9 | 32 |
| 59 | |
| lineage3;lineage2.1 | 1 |
| lineage4 | 16 |
| lineage4.1.1.3 | 1 |
| lineage4.1.2 | 1 |
| lineage4.1.1 | 1 |
| lineage2.2.1 | 2 |
| lineage5.1.4 | 1 |
| lineage3 | 1 |
| lineage4.1.2.1 | 5 |
| lineage1.1 | 1 |
| lineage2.2 | 4 |
| lineage3.1 | 2 |
| La1.8.1 | 1 |
| La1.2 | 2 |
| lineage4.5 | 2 |
| lineage4.3.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.4.1.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 138 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675464 | HR-TB | lineage4.1 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675482 | HR-TB | None | SRR6325445 | HR-TB | None | ERR1035239 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None | ERR161033 | HR-TB | None | SRR3675486 | HR-TB | None | SRR3675247 | Other | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675265 | Other | lineage4 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675279 | Other | None | ERR176751 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675510 | Other | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675545 | HR-TB | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | ERR4817347 | HR-TB | lineage4 | None | SRR3675558 | HR-TB | None | ERR2446566 | Other | lineage4.1 | None | ERR212121 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR4816656 | HR-TB | None | ERR4816551 | HR-TB | lineage4.1.1.3 | None | SRR4035733 | Sensitive | lineage4.1.2 | None | ERR4818929 | HR-TB | None | ERR2229143 | Other | lineage4.1.1 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341456 | Other | None | ERR2509673 | Other | lineage2.2.1 | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341437 | Sensitive | lineage4.9 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR4821053 | Other | lineage3 | None | ERR2693238 | HR-TB | lineage4.9 | None | SRR5341330 | HR-TB | None | ERR2693239 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | ERR278594 | HR-TB | None | ERR4821655 | Sensitive | lineage4 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6045952 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045399 | Other | None | SRR6046299 | HR-TB | None | SRR6325444 | HR-TB | None | SRR6458421 | MDR-TB | lineage2.2.1 | None | SRR6325448 | HR-TB | None | SRR6046514 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046460 | HR-TB | None | SRR6325447 | HR-TB | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR3077978 | Other | lineage1.1 | None | SRR6325442 | HR-TB | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR323034 | HR-TB | lineage3.1 | None | ERR4831117 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR5311099 | HR-TB | None | ERR294248 | HR-TB | None | ERR323036 | HR-TB | None | ERR5311090 | HR-TB | None | ERR5311081 | HR-TB | None | ERR323038 | HR-TB | None | ERR323055 | HR-TB | None | ERR323041 | HR-TB | None | ERR323054 | HR-TB | lineage3.1 | None | ERR3797082 | Other | lineage4.9 | None | ERR3283017 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR323063 | HR-TB | None | ERR1023295 | HR-TB | lineage4.1.2.1 | None | ERR108471 | HR-TB | lineage4 | None | ERR3283040 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3797016 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR400320 | Sensitive | lineage4 | None | ERR3797083 | HR-TB | None | ERR400345 | Other | lineage4 | None | ERR4188350 | HR-TB | None | ERR4178226 | Sensitive | lineage4 | None | ERR4811030 | Sensitive | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769427 | Other | La1.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6358837 | HR-TB | None | ERR4812155 | Sensitive | None | ERR4811493 | HR-TB | None | ERR702404 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | SRR1165584 | Other | lineage4.1.2.1 | None | ERR772255 | MDR-TB | lineage4.3.2 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR752229 | Other | lineage4.5 | None | ERR760733 | MDR-TB | lineage4.1.2.1.1 | None | ERR8976043 | HR-TB | None | SRR1165506 | Other | lineage4.1.2.1 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1173767 | HR-TB | lineage4.4.1.1 | None | SRR1166821 | HR-TB | lineage4.1.2.1 | None | SRR1173453 | Other | lineage4.4.1.1 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR13861153 | Other | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR13861424 | RR-TB | lineage4.9 | None | SRR13861304 | Other | lineage4.9 | None | SRR13861413 | Sensitive | lineage4.9 | None | SRR13861532 | Other | lineage4.9 | None | SRR1640750 | HR-TB | None | SRR13861629 | RR-TB | lineage4.9 | None | SRR13861556 | Other | lineage4.9 | None | SRR13861586 | Other | lineage4.9 | None |
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