Rv0668 - c.774G>C
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
40 Sensitive
1 RR-TB
25 HR-TB
5 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 50 |
| lineage2.2.1 | 8 |
| La3;lineage4.9 | 8 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| La1.8.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage5.1.4 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| La3;lineage4 | 1 |
| lineage4.8 | 2 |
| lineage3 | 3 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.5 | 2 |
| lineage4.9;lineage9 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.3 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.2.1 | 1 |
| lineage4.9;lineage7 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1;lineage4.9 | 1 |
| 3 | |
| lineage4.1.2.1;lineage4.3.4.2.1 | 1 |
| La1.7;lineage4.9 | 1 |
| lineage3.1.2.1;lineage4 | 1 |
| lineage1;lineage4.9 | 2 |
| lineage4.3.4 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.4.1.1 | 1 |
| M.canetti;lineage1 | 1 |
| lineage4.3.4.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 106 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675541 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675387 | Other | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR473332 | Other | lineage4.9 | None | SRR7240033 | Other | La1.8.1 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | ERR2513283 | Sensitive | lineage5.1.4 | None | ERR4811493 | HR-TB | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR29055611 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | ERR3283028 | Other | La3;lineage4 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | SRR29097004 | Other | lineage3 | None | ERR2446566 | Other | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR6359069 | Sensitive | lineage4.9 | None | ERR752229 | Other | lineage4.5 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR4819933 | Sensitive | lineage4.9 | None | ERR9786639 | Sensitive | lineage4.8 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR867542 | HR-TB | lineage4.3 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR2512770 | Sensitive | lineage4.2.1 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR6359082 | Other | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR4796577 | HR-TB | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4798823 | HR-TB | None | SRR12708384 | Sensitive | lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR3675279 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR2660539 | Other | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR11465234 | Sensitive | lineage4.1.2.1;lineage4.3.4.2.1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | ERR4812155 | Other | lineage4.9 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR12708416 | Sensitive | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR11662690 | HR-TB | lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR3675477 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR28351455 | Other | lineage3.1.2.1;lineage4 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR3675522 | Other | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR5341345 | Sensitive | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR29050859 | Other | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR400326 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR11465235 | Sensitive | lineage4.3.4.2.1 | None | SRR6046564 | Sensitive | lineage4.9 | None |
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