Rv0001 - c.681G>T


Drug resistance types
23 Sensitive 0 RR-TB 4 HR-TB 3 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 11 Other
lineage Counts
lineage Count
lineage4.9 21
lineage1;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.4.1.1 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.2.1 3
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
1
lineage4.3.3 1
lineage4.2.1.1;lineage4.3.3 1
La1;lineage4.9 1
lineage1.1.3.1 1
La1;lineage4.1.2 1
lineage5.1.4 1
lineage4.1.1.3;lineage4.9 1
lineage4.5 1
lineage2.2.1;lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
spoligotype Counts
spoligotype Count
None 41
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675455 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
ERR4812155 Other lineage4.9 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR400326 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
ERR108471 HR-TB lineage4.9 None
SRR3675387 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR12708416 Sensitive None
ERR4796929 Sensitive lineage4.9 None
SRR12708419 Other lineage4.3.3 None
ERR4811030 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR3675580 Sensitive lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR3675279 Sensitive lineage4.9 None
SRR6045526 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR11662694 Other lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
SRR12708372 Sensitive lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR6044819 Sensitive lineage4.9 None
ERR2513283 Sensitive lineage5.1.4 None
ERR4797313 Sensitive lineage2.2.1 None
SRR19295647 Sensitive lineage4.9 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None