Rv0001 - c.681G>T
Drug resistance types
16 Sensitive
0 RR-TB
5 HR-TB
5 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
14 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.1 | 3 |
| lineage4.9 | 20 |
| lineage4.4.1.1 | 1 |
| lineage4.1.1.3;lineage4.9 | 1 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage4.5 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | 2 |
| lineage1.1.3.1 | 1 |
| 1 | |
| lineage2.2.1;lineage4 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage5.1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 40 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR9971114 | Other | lineage2.2.1 | None | SRR6046245 | Other | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR400345 | Other | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | SRR19295647 | HR-TB | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR2026697 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR12708416 | Sensitive | None | ERR400320 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR2026695 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 | None | SRR3675455 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | ERR2026698 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 | None | SRR6045526 | Other | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR3675387 | Other | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | ERR2026696 | MDR-TB | La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None |
|---|
