Rv3596c - c.579C>T
Drug resistance types
96 Sensitive
2 RR-TB
21 HR-TB
3 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
48 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 104 |
| lineage2.2.1 | 6 |
| lineage3 | 4 |
| M.canetti;lineage2.2 | 2 |
| lineage4.9;lineage7 | 1 |
| La1.6;lineage4 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage3;lineage4.4.1.1 | 2 |
| lineage2.2.1;lineage4 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| lineage4.1.2.1 | 4 |
| lineage1.1.2 | 1 |
| lineage4.1;lineage4.9 | 2 |
| lineage4.4.1.1 | 1 |
| La1;lineage2;lineage4.9 | 1 |
| La1;lineage4.9 | 2 |
| La1;lineage4.1.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La1.7;lineage4.2 | 1 |
| lineage3;lineage4.9 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage1.2.2.2 | 1 |
| La1.7;lineage4.9 | 5 |
| lineage4.5 | 1 |
| lineage4.3.3 | 1 |
| 2 | |
| lineage4.3.4.2 | 1 |
| lineage6.1.3 | 1 |
| lineage1.1.1;lineage4 | 1 |
| lineage4.8;lineage4.9 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage4.1.2 | 1 |
| La1.8.1 | 1 |
| La1.7 | 1 |
| lineage4 | 3 |
| lineage4.1.1.2 | 1 |
| lineage4.2.1 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage3;lineage4 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage5.1.4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 174 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR349264 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | SRR1173281 | Other | lineage3 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR363446 | Sensitive | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR6045503 | Sensitive | lineage4.9 | None | ERR363500 | Sensitive | lineage4.9 | None | ERR323062 | Sensitive | lineage4.9 | None | SRR1158918 | Sensitive | lineage4.9 | None | ERR4811030 | Sensitive | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341373 | Other | lineage4.9 | None | ERR363453 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | ERR369158 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR4800302 | Pre-XDR-TB | lineage3;lineage4.4.1.1 | in | SRR1159378 | Other | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR4178309 | Other | lineage4.1.2.1 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR363490 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4.9 | None | ERR323107 | Sensitive | lineage4.9 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR349300 | Sensitive | lineage4.9 | None | SRR3675235 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR373945 | Sensitive | lineage4.9 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR067699 | Sensitive | La1;lineage2;lineage4.9 | None | ERR6865513 | Other | lineage4.1.2.1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR2514552 | Sensitive | lineage3 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675260 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR6866639 | Other | lineage4.9 | None | SRR3675229 | Sensitive | lineage4.9 | None | SRR3675247 | Other | lineage4.9 | None | SRR5341308 | Sensitive | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR23961559 | Other | La1.7;lineage4.2 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | SRR28044782 | Sensitive | lineage1.2.2.2 | None | ERR552960 | Sensitive | lineage4.1.2.1 | de | ERR736872 | HR-TB | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR4811031 | Sensitive | lineage4.5 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | ERR369163 | Sensitive | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR363498 | Sensitive | lineage4.9 | None | ERR502511 | Sensitive | lineage4.9 | None | SRR3675522 | Other | lineage4.9 | None | ERR9786592 | Other | lineage4.3.4.2 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR6358979 | Other | lineage4.9 | None | ERR4821276 | Sensitive | lineage3 | None | ERR6866410 | Sensitive | lineage4.9 | None | ERR363479 | Sensitive | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR323115 | Sensitive | lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR502510 | Sensitive | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | SRR6046897 | Sensitive | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR363449 | Sensitive | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | SRR6044876 | Sensitive | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR6045706 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR736834 | Sensitive | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | ERR4797264 | Sensitive | lineage4.9 | None | ERR4024991 | Other | lineage4.8;lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR13290882 | Pre-XDR-TB | lineage3;lineage4.4.1.1 | None | ERR369159 | Sensitive | lineage4.9 | None | ERR4797474 | Sensitive | lineage4.9 | None | ERR6866022 | Other | lineage4.8;lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | ERR4797350 | Sensitive | lineage1;lineage4.9 | None | ERR137286 | Other | lineage4.9 | None | ERR323066 | Sensitive | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR4798431 | Sensitive | lineage4.1;lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR12708384 | Sensitive | lineage4.9 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR5341296 | Sensitive | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR363421 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR4798099 | Other | lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | ERR4797610 | Sensitive | lineage3 | in | ERR363474 | Sensitive | lineage4.9 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR4797184 | Sensitive | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR349299 | Other | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR400326 | Other | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6511621 | Sensitive | lineage4.9 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | ERR751326 | Other | lineage4.9 | None | ERR363499 | Sensitive | lineage4.9 | None | SRR6046564 | Sensitive | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR3675387 | Other | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR1173740 | Other | lineage3;lineage4 | None | ERR373947 | Other | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4.9 | None | SRR3675585 | Sensitive | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR12708416 | Sensitive | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR2513283 | Sensitive | lineage5.1.4 | None |
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